Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00908
         (765 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1258 + 35806557-35806932,35807517-35807679,35807789-358078...    29   5.4  
01_06_0705 + 31342236-31342415,31343086-31343391,31343555-313437...    28   7.1  
03_05_1138 + 30684014-30684386,30684480-30684865,30684870-306849...    28   9.4  

>01_06_1258 +
           35806557-35806932,35807517-35807679,35807789-35807837,
           35807943-35808866,35808954-35809049,35809142-35809257,
           35809345-35809447,35809570-35809658,35809750-35809900,
           35809995-35810141,35810238-35810366,35810451-35810529,
           35810616-35810725
          Length = 843

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = +2

Query: 113 RLNGFKRDIFITMLRPRFSSREHGRQRCPVSMSGVPSWLIKVISSFSATIEIHS 274
           RL     D F+  L P F  R+        S  GV   L+ +I SFS T+  HS
Sbjct: 399 RLINCPSDKFMATLGPNFGYRQPTYADLLESAPGVTGILMIIIMSFSFTLATHS 452


>01_06_0705 +
           31342236-31342415,31343086-31343391,31343555-31343796,
           31343927-31344122,31344419-31344602,31344984-31345147,
           31345454-31345981,31346530-31346630,31347619-31347634,
           31347834-31347941,31348028-31348078,31349059-31349100,
           31349442-31349541,31350039-31350256,31350367-31350807,
           31350916-31351043,31351131-31351992
          Length = 1288

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -1

Query: 759 IGAKSVSLNNSALEM*ALILFSSLQAQPMSTRLTMPQCVFKSCKKCPKKQFNGRSFL 589
           IG     + +S +E+  L++ + LQA   S +L  P CVF    KC     +GR+ L
Sbjct: 797 IGRYKTVIISSVIELVGLLILT-LQAH--SNKLKPPYCVFPFDPKCETVSGDGRTHL 850


>03_05_1138 +
           30684014-30684386,30684480-30684865,30684870-30684962,
           30684963-30685108,30685211-30685454,30685562-30685666,
           30685774-30685956,30686052-30686738
          Length = 738

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/26 (38%), Positives = 20/26 (76%)
 Frame = -1

Query: 282 TCAEWISIVAEKEEITFISQLGTPLI 205
           T AEW+S+V++ ++ +  ++LG P+I
Sbjct: 140 TAAEWVSMVSDFQKGSLSTRLGIPMI 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,960,849
Number of Sequences: 37544
Number of extensions: 348635
Number of successful extensions: 702
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)