Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00908
         (765 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94173-1|AAA51898.1| 2237|Homo sapiens N-type calcium channel al...    31   4.5  
M94172-1|AAA51897.1| 2339|Homo sapiens N-type calcium channel al...    31   4.5  
AL772363-4|CAI17142.1| 2337|Homo sapiens calcium channel, voltag...    31   4.5  
AL772363-3|CAI17144.1| 2339|Homo sapiens calcium channel, voltag...    31   4.5  
AL772363-2|CAI17143.1| 2338|Homo sapiens calcium channel, voltag...    31   4.5  
AL772363-1|CAI17141.1| 2237|Homo sapiens calcium channel, voltag...    31   4.5  
AL591424-4|CAI40688.1| 2337|Homo sapiens calcium channel, voltag...    31   4.5  
AL591424-3|CAI40687.1| 2339|Homo sapiens calcium channel, voltag...    31   4.5  
AL591424-2|CAI40686.1| 2338|Homo sapiens calcium channel, voltag...    31   4.5  
AL591424-1|CAI40685.1| 2237|Homo sapiens calcium channel, voltag...    31   4.5  
AF302782-2|AAG14397.1|  145|Homo sapiens calcium channel alpha12...    31   4.5  
AF302782-1|AAG14398.1|  187|Homo sapiens calcium channel alpha12...    31   4.5  
AF238296-1|AAG13645.2|  108|Homo sapiens calcium channel alpha12...    31   4.5  
AB209467-1|BAD92704.1| 1370|Homo sapiens calcium channel, voltag...    31   4.5  

>M94173-1|AAA51898.1| 2237|Homo sapiens N-type calcium channel alpha-1
            subunit protein.
          Length = 2237

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691  TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
            TSGT  V P H   + C+QK+++ PE A
Sbjct: 1031 TSGTVTVGPMHTLPSTCLQKVEEQPEDA 1058


>M94172-1|AAA51897.1| 2339|Homo sapiens N-type calcium channel alpha-1
            subunit protein.
          Length = 2339

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691  TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
            TSGT  V P H   + C+QK+++ PE A
Sbjct: 1031 TSGTVTVGPMHTLPSTCLQKVEEQPEDA 1058


>AL772363-4|CAI17142.1| 2337|Homo sapiens calcium channel,
            voltage-dependent, N type, alphar), member 6 protein.
          Length = 2337

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691  TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
            TSGT  V P H   + C+QK+++ PE A
Sbjct: 1031 TSGTVTVGPMHTLPSTCLQKVEEQPEDA 1058


>AL772363-3|CAI17144.1| 2339|Homo sapiens calcium channel,
            voltage-dependent, N type, alpha protein.
          Length = 2339

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691  TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
            TSGT  V P H   + C+QK+++ PE A
Sbjct: 1031 TSGTVTVGPMHTLPSTCLQKVEEQPEDA 1058


>AL772363-2|CAI17143.1| 2338|Homo sapiens calcium channel,
            voltage-dependent, N type, alpha protein.
          Length = 2338

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691  TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
            TSGT  V P H   + C+QK+++ PE A
Sbjct: 1032 TSGTVTVGPMHTLPSTCLQKVEEQPEDA 1059


>AL772363-1|CAI17141.1| 2237|Homo sapiens calcium channel,
            voltage-dependent, N type, alpha7a (RPL7A) protein.
          Length = 2237

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691  TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
            TSGT  V P H   + C+QK+++ PE A
Sbjct: 1031 TSGTVTVGPMHTLPSTCLQKVEEQPEDA 1058


>AL591424-4|CAI40688.1| 2337|Homo sapiens calcium channel,
            voltage-dependent, N type, alpha(TBP)-associated factor,
            100kD protein.
          Length = 2337

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691  TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
            TSGT  V P H   + C+QK+++ PE A
Sbjct: 1031 TSGTVTVGPMHTLPSTCLQKVEEQPEDA 1058


>AL591424-3|CAI40687.1| 2339|Homo sapiens calcium channel,
            voltage-dependent, N type, alphabeta family protein.
          Length = 2339

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691  TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
            TSGT  V P H   + C+QK+++ PE A
Sbjct: 1031 TSGTVTVGPMHTLPSTCLQKVEEQPEDA 1058


>AL591424-2|CAI40686.1| 2338|Homo sapiens calcium channel,
            voltage-dependent, N type, alphaate 3A protein.
          Length = 2338

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691  TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
            TSGT  V P H   + C+QK+++ PE A
Sbjct: 1032 TSGTVTVGPMHTLPSTCLQKVEEQPEDA 1059


>AL591424-1|CAI40685.1| 2237|Homo sapiens calcium channel,
            voltage-dependent, N type, alpha, alpha protein.
          Length = 2237

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691  TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
            TSGT  V P H   + C+QK+++ PE A
Sbjct: 1031 TSGTVTVGPMHTLPSTCLQKVEEQPEDA 1058


>AF302782-2|AAG14397.1|  145|Homo sapiens calcium channel alpha12.2
           subunit protein.
          Length = 145

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691 TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
           TSGT  V P H   + C+QK+++ PE A
Sbjct: 15  TSGTVTVGPMHTLPSTCLQKVEEQPEDA 42


>AF302782-1|AAG14398.1|  187|Homo sapiens calcium channel alpha12.2
           subunit protein.
          Length = 187

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691 TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
           TSGT  V P H   + C+QK+++ PE A
Sbjct: 15  TSGTVTVGPMHTLPSTCLQKVEEQPEDA 42


>AF238296-1|AAG13645.2|  108|Homo sapiens calcium channel alpha12.2
           subunit protein.
          Length = 108

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691 TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
           TSGT  V P H   + C+QK+++ PE A
Sbjct: 15  TSGTVTVGPMHTLPSTCLQKVEEQPEDA 42


>AB209467-1|BAD92704.1| 1370|Homo sapiens calcium channel,
           voltage-dependent, L type, alpha 1B subunit variant
           protein.
          Length = 1370

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 691 TSGTANVNPSHNA-AVCIQKLQKMPEKA 611
           TSGT  V P H   + C+QK+++ PE A
Sbjct: 60  TSGTVTVGPMHTLPSTCLQKVEEQPEDA 87


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,889,801
Number of Sequences: 237096
Number of extensions: 2097093
Number of successful extensions: 7581
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7581
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)