Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00907
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    26   0.97 
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           26   0.97 
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           26   0.97 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   5.2  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       24   5.2  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   9.0  

>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 183 KNGLCRRKVNQRSLVQLGYGRRLHNAVKTVRTST 284
           K+   R KVN +S + LGY ++L + + T+  ST
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQKLRDGI-TLTLST 260


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 183 KNGLCRRKVNQRSLVQLGYGRRLHNAVKTVRTST 284
           K+   R KVN +S + LGY ++L + + T+  ST
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQKLRDGI-TLTLST 260


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 183 KNGLCRRKVNQRSLVQLGYGRRLHNAVKTVRTST 284
           K+   R KVN +S + LGY ++L + + T+  ST
Sbjct: 228 KDACVRAKVNNQSQIGLGYQQKLRDGI-TLTLST 260


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 366 YANDMAFLMPCETSRETTSR 307
           YA+D+A L+P  T+ E  +R
Sbjct: 718 YADDLALLVPATTTDEVRAR 737


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 218 SLIDLASAKTI--FVLNSVWVFKSAGSSYPAP*YKP 117
           S + L +A+T+  F  N+ + F++    YP P Y P
Sbjct: 28  SSLCLTTAQTVQQFAYNTDFFFRNPSEIYPQPVYVP 63


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 308 RDVVSRLVSQGIKNAMSFAYKLWHE 382
           R  +SRL++    + M +A  +WHE
Sbjct: 848 RTSMSRLLANVADSTMRYAAPVWHE 872


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,254
Number of Sequences: 2352
Number of extensions: 13378
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)