Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00904
(767 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 142 4e-34
03_01_0547 + 4093196-4093657,4094267-4095148 142 4e-34
03_01_0544 + 4082528-4082989,4083585-4084466 142 4e-34
03_01_0543 + 4076981-4077442,4078145-4079026 142 4e-34
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 62 5e-10
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 55 7e-08
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 55 7e-08
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 53 2e-07
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 52 4e-07
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 52 7e-07
02_04_0462 + 23131433-23132836 50 2e-06
02_01_0202 + 1366149-1366594,1368444-1368444,1368616-1368743,136... 30 2.3
11_01_0398 - 3008074-3008428,3009775-3009926,3010070-3011368 29 5.4
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 29 5.4
06_01_0337 - 2432823-2432933,2433280-2433373,2434079-2434170,243... 29 5.4
03_01_0019 + 167900-168343,168567-168751,169076-169430 28 7.1
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 28 9.4
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 142 bits (343), Expect = 4e-34
Identities = 60/87 (68%), Positives = 77/87 (88%)
Frame = +1
Query: 253 SVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 432
++PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVL
Sbjct: 290 ALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVL 349
Query: 433 DCHTAHIACKFAEIKEKVDRRTGKSMK 513
DCHT+HIA KFAE+ K+DRR+GK ++
Sbjct: 350 DCHTSHIAVKFAELVTKIDRRSGKELE 376
Score = 133 bits (322), Expect = 1e-31
Identities = 62/77 (80%), Positives = 67/77 (87%)
Frame = +2
Query: 23 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 202
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 272
Query: 203 ITTEVKSVEMHHEALQE 253
+TTEVKSVEMHHEALQE
Sbjct: 273 LTTEVKSVEMHHEALQE 289
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/70 (62%), Positives = 55/70 (78%)
Frame = +3
Query: 510 EVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAG 689
E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+
Sbjct: 376 EKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPT 435
Query: 690 GGKVTKSCRK 719
G KVTK+ K
Sbjct: 436 GAKVTKAAAK 445
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 142 bits (343), Expect = 4e-34
Identities = 60/87 (68%), Positives = 77/87 (88%)
Frame = +1
Query: 253 SVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 432
++PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVL
Sbjct: 290 ALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVL 349
Query: 433 DCHTAHIACKFAEIKEKVDRRTGKSMK 513
DCHT+HIA KFAE+ K+DRR+GK ++
Sbjct: 350 DCHTSHIAVKFAELVTKIDRRSGKELE 376
Score = 133 bits (322), Expect = 1e-31
Identities = 62/77 (80%), Positives = 67/77 (87%)
Frame = +2
Query: 23 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 202
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 272
Query: 203 ITTEVKSVEMHHEALQE 253
+TTEVKSVEMHHEALQE
Sbjct: 273 LTTEVKSVEMHHEALQE 289
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/70 (62%), Positives = 55/70 (78%)
Frame = +3
Query: 510 EVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAG 689
E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+
Sbjct: 376 EKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPT 435
Query: 690 GGKVTKSCRK 719
G KVTK+ K
Sbjct: 436 GAKVTKAAAK 445
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 142 bits (343), Expect = 4e-34
Identities = 60/87 (68%), Positives = 77/87 (88%)
Frame = +1
Query: 253 SVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 432
++PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVL
Sbjct: 290 ALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVL 349
Query: 433 DCHTAHIACKFAEIKEKVDRRTGKSMK 513
DCHT+HIA KFAE+ K+DRR+GK ++
Sbjct: 350 DCHTSHIAVKFAELVTKIDRRSGKELE 376
Score = 133 bits (322), Expect = 1e-31
Identities = 62/77 (80%), Positives = 67/77 (87%)
Frame = +2
Query: 23 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 202
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 272
Query: 203 ITTEVKSVEMHHEALQE 253
+TTEVKSVEMHHEALQE
Sbjct: 273 LTTEVKSVEMHHEALQE 289
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/70 (62%), Positives = 55/70 (78%)
Frame = +3
Query: 510 EVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAG 689
E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+
Sbjct: 376 EKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPT 435
Query: 690 GGKVTKSCRK 719
G KVTK+ K
Sbjct: 436 GAKVTKAAAK 445
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 142 bits (343), Expect = 4e-34
Identities = 60/87 (68%), Positives = 77/87 (88%)
Frame = +1
Query: 253 SVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 432
++PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVL
Sbjct: 290 ALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVL 349
Query: 433 DCHTAHIACKFAEIKEKVDRRTGKSMK 513
DCHT+HIA KFAE+ K+DRR+GK ++
Sbjct: 350 DCHTSHIAVKFAELVTKIDRRSGKELE 376
Score = 133 bits (322), Expect = 1e-31
Identities = 62/77 (80%), Positives = 67/77 (87%)
Frame = +2
Query: 23 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 202
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 272
Query: 203 ITTEVKSVEMHHEALQE 253
+TTEVKSVEMHHEALQE
Sbjct: 273 LTTEVKSVEMHHEALQE 289
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/70 (62%), Positives = 55/70 (78%)
Frame = +3
Query: 510 EVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAG 689
E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+
Sbjct: 376 EKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPT 435
Query: 690 GGKVTKSCRK 719
G KVTK+ K
Sbjct: 436 GAKVTKAAAK 445
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +2
Query: 20 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAP 196
DG CL++A+D + PP+R KPLRLP+ DV+ +G V + G+VE G + G+ ++ P
Sbjct: 442 DGNCLLKAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMP 501
Query: 197 ANITTEVKSVE 229
VK++E
Sbjct: 502 FGELAVVKTIE 512
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 519 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 671
P+ + S A++ + K +CVE F LGR +R T+AVG++ V
Sbjct: 600 PRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLRSQGNTIAVGIVSRV 650
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT-VPVGRVETGVLKPGTIVVFAPA 199
G CL++A+D++ P+R KPL LP+ DV K G G++ETG ++ G+ V+ +P
Sbjct: 459 GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPC 518
Query: 200 NITTEVKSVE 229
VKS+E
Sbjct: 519 GEVAAVKSIE 528
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 519 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 662
P+ +KS A+V + P+CV+ F + LGR +R T+AVGV+
Sbjct: 624 PRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT-VPVGRVETGVLKPGTIVVFAPA 199
G CL++A+D++ P+R KPL LP+ DV K G G++ETG ++ G+ V+ +P
Sbjct: 459 GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPC 518
Query: 200 NITTEVKSVE 229
VKS+E
Sbjct: 519 GEVAAVKSIE 528
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 519 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 662
P+ +KS A+V + P+CV+ F + LGR +R T+AVGV+
Sbjct: 624 PRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +2
Query: 20 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 199
DG CL E LD I P R P+R+P+ D YK +GTV +G++E+G ++ G ++ P
Sbjct: 206 DGPCLFEVLDCIEVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPN 263
Query: 200 NITTEVKSVEM 232
+V + +
Sbjct: 264 KTNVKVIGISL 274
Score = 36.7 bits (81), Expect = 0.020
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 519 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 629
P +K+G + + + +C+E+F +FP LGRF +R
Sbjct: 379 PLFVKNGAVVVCRIQVNNLICIENFSDFPQLGRFTLR 415
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 52.4 bits (120), Expect = 4e-07
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Frame = +2
Query: 32 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---TIVVFAPA 199
L++A+D +P P R DK +P++DV+ I G GTV GRVE G +K G I+ P+
Sbjct: 249 LMDAVDEYIPDPVRQLDKSFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPS 308
Query: 200 N-ITTEVKSVEMHHEAL 247
+ T V VEM + L
Sbjct: 309 GPLKTTVTGVEMFKKIL 325
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 51.6 bits (118), Expect = 7e-07
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +2
Query: 23 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 202
G CL E LD I P R P+R+P+ D YK +GTV +G++E+G + G ++ P
Sbjct: 162 GPCLFEVLDCIQVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNK 219
Query: 203 ITTEVKSVEMHHEALQ 250
+V SV + ++
Sbjct: 220 ANVKVISVHCDEDRVR 235
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Frame = +1
Query: 253 SVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN--HPGQISNGYTP 426
+ PG+NV + + ++ G+V K NP ++F AQ+ +L + GY
Sbjct: 237 AAPGENVRVKLSGIEEDDITAGFVLSSIK-NPVSAISEFRAQLQILELLDNAIFTAGYKA 295
Query: 427 VLDCHTAHIACKFAEIKEKVD---RRTG--KSMKSTQNP 528
VL H+ C+ E+ E++D R+ G K KS + P
Sbjct: 296 VLHIHSVVEECEIVELIEEIDLKRRKEGDIKKKKSKRKP 334
>02_04_0462 + 23131433-23132836
Length = 467
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +2
Query: 32 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANIT 208
LI+++D +P P R TD P L ++DV+ I G GTV GR+E G +K G V T
Sbjct: 260 LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRET 319
Query: 209 TE--VKSVEMHHEALQE 253
V VEM + + +
Sbjct: 320 RNCTVTGVEMFQKTMDD 336
>02_01_0202 +
1366149-1366594,1368444-1368444,1368616-1368743,
1368943-1369039
Length = 223
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +1
Query: 238 RSSPRSVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNG 417
R P + GD+ G V RR V GD + P + DF V++L H S+G
Sbjct: 12 RKKPLGLLGDSGGGEAPAAEVLRRRRVPVPGDGLSPIPMFSVDFRLFVLILPH----SHG 67
Query: 418 YTPVL 432
Y +L
Sbjct: 68 YLVLL 72
>11_01_0398 - 3008074-3008428,3009775-3009926,3010070-3011368
Length = 601
Score = 28.7 bits (61), Expect = 5.4
Identities = 28/99 (28%), Positives = 42/99 (42%)
Frame = +1
Query: 229 DAPRSSPRSVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQI 408
DA SS RS P +G V + R + D+ P+ + + Q +V G I
Sbjct: 497 DAGGSSTRS-PAAAIGALVHLLKTAPSLREGLQSDAAAVVPQEPS--SVQKVVTEEHGSI 553
Query: 409 SNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSMKSTQN 525
++ TPV K+ E+KE + R GK+ S N
Sbjct: 554 ASSSTPVTATDALEELKKYREVKESILNR-GKTQVSGTN 591
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/86 (27%), Positives = 36/86 (41%)
Frame = +1
Query: 367 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSMKSTQNPSSLEMQ 546
F + + +HP + PV+ HT + KFA+ + + T T PSS
Sbjct: 67 FLPRNLQTSHPAKAPPASLPVI--HTVYHYAKFAKYYSEEEAVT------TAMPSSSSPD 118
Query: 547 PLSTWYLPSLYV*SPSRNSHPSVVLL 624
L W+LP V S +VV+L
Sbjct: 119 VLYLWHLPDPKVCGDSHGKSQTVVVL 144
>06_01_0337 -
2432823-2432933,2433280-2433373,2434079-2434170,
2434565-2434679,2435253-2435335,2435544-2435654,
2435884-2435971,2436004-2436326
Length = 338
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 244 SPRSVPGD-NVGFNVKNVSVKELRRGYVAGDSKNNP 348
+PR V GD VGFNV+N+ LR+ V D P
Sbjct: 248 NPRLVSGDVGVGFNVRNLRRNFLRKWKVFYDDPKRP 283
>03_01_0019 + 167900-168343,168567-168751,169076-169430
Length = 327
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 198 AGAKTTMVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPS 19
+ + + P PV+ PT T P PPI + G G S G GG + +RA+ P+
Sbjct: 48 SSSSNSSTPSIPPPVA--PTPTAPTPPI-PSPGTGSSNGSSGGGGGGWLNARATWYGAPN 104
>10_01_0097 -
1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 24 ENASLKLSMPSCHLPAPLTSPCVFPCKTYTKS 119
E A++ +S P LP P P +FP + T+S
Sbjct: 21 EEAAVVVSQPQKTLPVPTAGPSLFPQQEVTQS 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,189,703
Number of Sequences: 37544
Number of extensions: 551291
Number of successful extensions: 2047
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2042
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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