Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00904
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 154 8e-38
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 154 8e-38
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 154 8e-38
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 48 1e-05
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 39 0.003
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 39 0.003
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 39 0.003
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 39 0.005
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 39 0.005
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.90
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 1.2
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 1.2
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z71185-7|CAA94907.2| 520|Caenorhabditis elegans Hypothetical pr... 29 4.8
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 154 bits (373), Expect = 8e-38
Identities = 69/91 (75%), Positives = 78/91 (85%)
Frame = +1
Query: 241 SSPRSVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGY 420
S P +VPGDNVGFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGY
Sbjct: 264 SLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGY 323
Query: 421 TPVLDCHTAHIACKFAEIKEKVDRRTGKSMK 513
TPVLDCHTAHIACKF E+KEKVDRRTGK ++
Sbjct: 324 TPVLDCHTAHIACKFNELKEKVDRRTGKKVE 354
Score = 151 bits (366), Expect = 5e-37
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +2
Query: 2 RKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTI 181
RKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +
Sbjct: 184 RKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMV 243
Query: 182 VVFAPANITTEVKSVEMHHEALQE 253
V FAP N+TTEVKSVEMHHE+L E
Sbjct: 244 VTFAPQNVTTEVKSVEMHHESLPE 267
Score = 102 bits (244), Expect = 3e-22
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +3
Query: 519 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 698
PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V + GK
Sbjct: 357 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGK 416
Query: 699 VTKSCRK 719
VTKS +K
Sbjct: 417 VTKSAQK 423
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 154 bits (373), Expect = 8e-38
Identities = 69/91 (75%), Positives = 78/91 (85%)
Frame = +1
Query: 241 SSPRSVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGY 420
S P +VPGDNVGFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGY
Sbjct: 298 SLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGY 357
Query: 421 TPVLDCHTAHIACKFAEIKEKVDRRTGKSMK 513
TPVLDCHTAHIACKF E+KEKVDRRTGK ++
Sbjct: 358 TPVLDCHTAHIACKFNELKEKVDRRTGKKVE 388
Score = 151 bits (366), Expect = 5e-37
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +2
Query: 2 RKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTI 181
RKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +
Sbjct: 218 RKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMV 277
Query: 182 VVFAPANITTEVKSVEMHHEALQE 253
V FAP N+TTEVKSVEMHHE+L E
Sbjct: 278 VTFAPQNVTTEVKSVEMHHESLPE 301
Score = 102 bits (244), Expect = 3e-22
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +3
Query: 519 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 698
PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V + GK
Sbjct: 391 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGK 450
Query: 699 VTKSCRK 719
VTKS +K
Sbjct: 451 VTKSAQK 457
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 154 bits (373), Expect = 8e-38
Identities = 69/91 (75%), Positives = 78/91 (85%)
Frame = +1
Query: 241 SSPRSVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGY 420
S P +VPGDNVGFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGY
Sbjct: 298 SLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGY 357
Query: 421 TPVLDCHTAHIACKFAEIKEKVDRRTGKSMK 513
TPVLDCHTAHIACKF E+KEKVDRRTGK ++
Sbjct: 358 TPVLDCHTAHIACKFNELKEKVDRRTGKKVE 388
Score = 151 bits (366), Expect = 5e-37
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +2
Query: 2 RKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTI 181
RKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +
Sbjct: 218 RKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMV 277
Query: 182 VVFAPANITTEVKSVEMHHEALQE 253
V FAP N+TTEVKSVEMHHE+L E
Sbjct: 278 VTFAPQNVTTEVKSVEMHHESLPE 301
Score = 102 bits (244), Expect = 3e-22
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +3
Query: 519 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 698
PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V + GK
Sbjct: 391 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGK 450
Query: 699 VTKSCRK 719
VTKS +K
Sbjct: 451 VTKSAQK 457
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/89 (30%), Positives = 48/89 (53%)
Frame = +1
Query: 250 RSVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV 429
R V GDN+ F +K + EL+ G++ S ++ K F A+V+VL H I++GY+ V
Sbjct: 393 RVVAGDNIKFKLKGIEENELQGGFIIC-SPDSLAKTGRVFDAEVLVLEHRSIIASGYSCV 451
Query: 430 LDCHTAHIACKFAEIKEKVDRRTGKSMKS 516
L +A + +D++TG+ ++
Sbjct: 452 LHIQSAVEEVTVKGVIATIDKKTGEKKRA 480
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 522 KSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-VIKAV 671
K +K + I+ L +P +E F+E+P LGRF +RD +T+A+G V+K V
Sbjct: 481 KFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 23 GKCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 199
G C IE +D +LP R + P+R + + Y +GTV +G++E+G ++ G +V P
Sbjct: 318 GPCFIEFIDVLLPSYKRDFNGPVRCTVAEKYS--EMGTVIIGKMESGCVQKGDTLVVMPN 375
Query: 200 NITTEVKSV 226
+V +
Sbjct: 376 KQPVQVLQI 384
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 20 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG-VLKPGTIVVFAP 196
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G V K + + +
Sbjct: 371 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSS 430
Query: 197 ANITT 211
T
Sbjct: 431 VTAAT 435
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 504 IYEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 671
I + P+ I G +A+V + + +E+F LGR R T+A G+++ V
Sbjct: 533 ILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 20 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG-VLKPGTIVVFAP 196
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G V K + + +
Sbjct: 389 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSS 448
Query: 197 ANITT 211
T
Sbjct: 449 VTAAT 453
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 504 IYEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 671
I + P+ I G +A+V + + +E+F LGR R T+A G+++ V
Sbjct: 551 ILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +2
Query: 11 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TI 181
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I
Sbjct: 226 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKI 284
Query: 182 VVFAPANITTEVKSV 226
+ T VKSV
Sbjct: 285 EIVGGTKDGTTVKSV 299
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +2
Query: 11 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TI 181
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I
Sbjct: 227 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKI 285
Query: 182 VVFAPANITTEVKSV 226
+ T VKSV
Sbjct: 286 EIVGGTKDGTTVKSV 300
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +2
Query: 11 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TI 181
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I
Sbjct: 227 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKI 285
Query: 182 VVFAPANITTEVKSV 226
+ T VKSV
Sbjct: 286 EIVGGTKDGTTVKSV 300
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 32 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANI 205
LI+ALD++ P R +P+ I G GTV VG +E GVLK G V +
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTL 281
Query: 206 TTEVKSVEMHHEALQEV 256
T +++ ++++EV
Sbjct: 282 QTTASDIQVFGKSVKEV 298
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 32 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANI 205
LI+ALD++ P R +P+ I G GTV VG +E GVLK G V +
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTL 281
Query: 206 TTEVKSVEMHHEALQEV 256
T +++ ++++EV
Sbjct: 282 QTTASDIQVFGKSVKEV 298
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 53 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 232
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 191 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 250
Query: 233 HHEALQEV 256
+ + +V
Sbjct: 251 WKQRVGQV 258
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 53 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 232
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 150 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 209
Query: 233 HHEALQEV 256
+ + +V
Sbjct: 210 WKQRVGQV 217
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -3
Query: 330 TSNITTTQFLDGHVLYVETYIVSRYTSWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVS 151
TS +TT T I S T++ ++ ST TS + + T P T +
Sbjct: 300 TSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLST 359
Query: 150 TLPTGTVP 127
++PT T P
Sbjct: 360 SIPTTTTP 367
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -3
Query: 330 TSNITTTQFLDGHVLYVETYIVSRYTSWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVS 151
TS +TT T I S T++ ++ ST TS + + T P T +
Sbjct: 300 TSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLST 359
Query: 150 TLPTGTVP 127
++PT T P
Sbjct: 360 SIPTTTTP 367
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +2
Query: 83 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 202
P + D+Y + G+GT+ G + +G ++ I++ P +
Sbjct: 373 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTS 412
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +2
Query: 83 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 202
P + D+Y + G+GT+ G + +G ++ I++ P +
Sbjct: 372 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTS 411
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 264 SRYTSWRASWCISTDLTSVVMLAGAKTTMVPGFN--TPVSTLPTGTVPIPPILY 109
S+ TS R S +S D T V + + VP + VST PT +PPI Y
Sbjct: 47 SQSTSERTSRSVSPDSTPVRVTTSTLLSTVPTSQDISGVSTAPTTKATLPPITY 100
>Z71185-7|CAA94907.2| 520|Caenorhabditis elegans Hypothetical
protein C35A5.5 protein.
Length = 520
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 519 G*LHRFTSTTVNFFFDFCKFAGNVGSVAIQYW 424
G LH + ++ ++ FFD + +G V I YW
Sbjct: 209 GHLHMYVTSIIDTFFDLVQEYERLGYVTIDYW 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,658,918
Number of Sequences: 27780
Number of extensions: 432694
Number of successful extensions: 1375
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -