Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00904
(767 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 181 8e-48
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 179 3e-47
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 179 3e-47
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 161 5e-42
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 56 4e-10
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.1
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 4.1
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 4.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 5.5
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 7.2
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 181 bits (440), Expect = 8e-48
Identities = 83/96 (86%), Positives = 90/96 (93%)
Frame = +1
Query: 253 SVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 432
+VPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL
Sbjct: 302 AVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 361
Query: 433 DCHTAHIACKFAEIKEKVDRRTGKSMKSTQNPSSLE 540
DCHTAHIACKFA+IKEK DRR GK+ + +NP S++
Sbjct: 362 DCHTAHIACKFADIKEKCDRRNGKT--TEENPKSIK 395
Score = 161 bits (392), Expect = 5e-42
Identities = 75/84 (89%), Positives = 78/84 (92%)
Frame = +2
Query: 2 RKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTI 181
RKEGK +GKCLIEALDAILPP RPTDK LRLPLQDVYKIGGIGTVPVGRVETGVLKPG +
Sbjct: 218 RKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMV 277
Query: 182 VVFAPANITTEVKSVEMHHEALQE 253
V FAPA +TTEVKSVEMHHEALQE
Sbjct: 278 VTFAPAGLTTEVKSVEMHHEALQE 301
Score = 118 bits (285), Expect = 5e-29
Identities = 58/73 (79%), Positives = 63/73 (86%)
Frame = +3
Query: 510 EVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAG 689
E NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAVGVIKAV FK+A
Sbjct: 388 EENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTFKDA- 446
Query: 690 GGKVTKSCRKGHQ 728
GKVTK+ K +
Sbjct: 447 AGKVTKAAEKAQK 459
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 179 bits (435), Expect = 3e-47
Identities = 81/96 (84%), Positives = 90/96 (93%)
Frame = +1
Query: 253 SVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 432
++PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNHPGQISNGYTPVL
Sbjct: 302 ALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVL 361
Query: 433 DCHTAHIACKFAEIKEKVDRRTGKSMKSTQNPSSLE 540
DCHTAHIACKFAEIKEK DRRTGK+ + +NP S++
Sbjct: 362 DCHTAHIACKFAEIKEKCDRRTGKT--TEENPKSIK 395
Score = 154 bits (373), Expect = 1e-39
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = +2
Query: 2 RKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTI 181
RK+G ADGK LIEALDAILPP+RPTDK LRLPLQDVYKIGGIGTVPVGRVETG+LKPG +
Sbjct: 218 RKDGNADGKTLIEALDAILPPSRPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGML 277
Query: 182 VVFAPANITTEVKSVEMHHEALQE 253
V FAPA +TTEVKSVEMHHEAL E
Sbjct: 278 VTFAPAALTTEVKSVEMHHEALTE 301
Score = 113 bits (271), Expect = 2e-27
Identities = 55/73 (75%), Positives = 62/73 (84%)
Frame = +3
Query: 510 EVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAG 689
E NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDMRQTVAVGVIK+V FK+
Sbjct: 388 EENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIKSVTFKDT- 446
Query: 690 GGKVTKSCRKGHQ 728
GKVTK+ K +
Sbjct: 447 QGKVTKAAEKAQK 459
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 179 bits (435), Expect = 3e-47
Identities = 81/96 (84%), Positives = 90/96 (93%)
Frame = +1
Query: 253 SVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 432
++PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNHPGQISNGYTPVL
Sbjct: 13 ALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVL 72
Query: 433 DCHTAHIACKFAEIKEKVDRRTGKSMKSTQNPSSLE 540
DCHTAHIACKFAEIKEK DRRTGK+ + +NP S++
Sbjct: 73 DCHTAHIACKFAEIKEKCDRRTGKT--TEENPKSIK 106
Score = 35.9 bits (79), Expect = 4e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3
Query: 510 EVNPKSIKSGDAAIVNLVPSK 572
E NPKSIKSGDAAIV L P+K
Sbjct: 99 EENPKSIKSGDAAIVMLQPTK 119
Score = 26.6 bits (56), Expect = 0.25
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 218 KSVEMHHEALQE 253
KSVEMHHEAL E
Sbjct: 1 KSVEMHHEALTE 12
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 161 bits (392), Expect = 5e-42
Identities = 75/84 (89%), Positives = 78/84 (92%)
Frame = +2
Query: 2 RKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTI 181
RKEGK +GKCLIEALDAILPP RPTDK LRLPLQDVYKIGGIGTVPVGRVETGVLKPG +
Sbjct: 161 RKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMV 220
Query: 182 VVFAPANITTEVKSVEMHHEALQE 253
V FAPA +TTEVKSVEMHHEALQE
Sbjct: 221 VTFAPAGLTTEVKSVEMHHEALQE 244
Score = 64.9 bits (151), Expect = 8e-13
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +1
Query: 253 SVPGDNVGFNVKNVSVKELRRGYVAGDSKN 342
+VPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 245 AVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 56.0 bits (129), Expect = 4e-10
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +2
Query: 2 RKEGKADGKCLIEALDAILPPARPTDK 82
RKEGK +GKCLIEALDAILPP RPTDK
Sbjct: 145 RKEGKVEGKCLIEALDAILPPTRPTDK 171
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 295 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 402
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 4.1
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -3
Query: 498 STTVNFFFDFCKFAGNVGSVAIQYWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 319
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 318 TTT 310
T T
Sbjct: 137 TVT 139
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.6 bits (46), Expect = 4.1
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -3
Query: 498 STTVNFFFDFCKFAGNVGSVAIQYWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 319
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 318 TTT 310
T T
Sbjct: 137 TVT 139
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 463 FAEIKEKVDRRTGKSMKSTQNPSSL 537
F IKE ++R T KSM++ S L
Sbjct: 510 FLTIKEWIERGTTKSMEAANIMSKL 534
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 414 RLHTSIGLPHCPHC 455
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,260
Number of Sequences: 438
Number of extensions: 4820
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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