Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00902
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...   109   2e-26
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...   108   5e-26
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.7  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score =  109 bits (262), Expect = 2e-26
 Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
 Frame = +2

Query: 257 ESSITIPFEQTFRDLSAQGNDPRR-DELATFNYCGCGWPQHMLVPKGTEAGMPFQLFVML 433
           ESS+TIPFE+TFR+L A  N P   D L+ FN+CGCGWPQHML+PKGTEAG P  LFVM+
Sbjct: 546 ESSLTIPFERTFRNLDA--NRPTGGDALSEFNFCGCGWPQHMLLPKGTEAGYPCHLFVMI 603

Query: 434 SNYDLDRIDQDDGKQLTCVEASSFC 508
           SNY  DR++QD     TC +  +FC
Sbjct: 604 SNYADDRVEQDTSG--TCSDGDTFC 626



 Score =  101 bits (242), Expect = 6e-24
 Identities = 44/84 (52%), Positives = 57/84 (67%)
 Frame = +3

Query: 3   GLDFSDNGPVYARFTHLNYRHFSYRINVNNTGSSRRTTVRIFITPKFDERNVPWIFSDQR 182
           GLDF   G V+ RFTHL  + F+Y+I VNN+G++R  T RIF+ P+FDER  PW+F +Q+
Sbjct: 461 GLDFQPRGSVFVRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQK 520

Query: 183 KMCIEMDRFVTVLNAGENNIVRQS 254
            M IE+DRF   L  G N I R S
Sbjct: 521 DMFIELDRFAVSLKQGTNTITRHS 544



 Score = 61.3 bits (142), Expect = 8e-12
 Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = +1

Query: 511 LKDKKYPDRRAMGFPFDR-PSSSATSLQDFILPNMGLQDITIQLQN-VTEPNPRN 669
           +KDK YPDRR+MG+PFDR P     +LQ F+ PNM +Q++ IQ  N + +P  R+
Sbjct: 628 IKDKLYPDRRSMGYPFDRMPRDGVDTLQQFLTPNMRVQEVVIQFSNRIVKPRNRD 682


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score =  108 bits (259), Expect = 5e-26
 Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 AESSITIPFEQTFRDLSAQGNDPRR-DELATFNYCGCGWPQHMLVPKGTEAGMPFQLFVM 430
           ++SS+TIPFE+TFR+L    N P+  +ELA FN+CGCGWPQHML+PKGT  GM  QLFVM
Sbjct: 546 SQSSVTIPFERTFRNLDL--NRPQGGEELAQFNFCGCGWPQHMLIPKGTPEGMKSQLFVM 603

Query: 431 LSNYDLDRIDQDDGKQLTCVEASSFC 508
           +SNYD D+IDQ    +  C +A S+C
Sbjct: 604 ISNYDDDKIDQ--STEGVCNDAGSYC 627



 Score = 94.7 bits (225), Expect = 7e-22
 Identities = 42/85 (49%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   GLDFSDNGPVYARFTHLNYRHFSYRINVNN-TGSSRRTTVRIFITPKFDERNVPWIFSDQ 179
           G+DF   G V+ RFTHL ++ F+Y+I VNN +  +R+ T RIF+ PK DER  PW+F DQ
Sbjct: 461 GMDFQPRGSVFVRFTHLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQ 520

Query: 180 RKMCIEMDRFVTVLNAGENNIVRQS 254
           + M IE+D+F   L  G+N I R S
Sbjct: 521 KIMFIELDKFTVNLKQGQNTITRAS 545



 Score = 63.3 bits (147), Expect = 2e-12
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = +1

Query: 511 LKDKKYPDRRAMGFPFDR-PSSSATSLQDFILPNMGLQDITIQLQNVT-EPNPRN 669
           +KDK YPDRR+MG+PFDR P +   +LQ F+ PNM +QD+TI+  + T  P  RN
Sbjct: 629 IKDKLYPDRRSMGYPFDRMPRNGVDTLQQFLTPNMRVQDVTIKFSDRTVRPKQRN 683


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 594 VLEAGGAARGSIERESHSAPIRIFLIL 514
           + E+GG  R + E+   S P+R  L L
Sbjct: 581 ITESGGRRRQTREKRKKSLPVRKLLEL 607


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,251
Number of Sequences: 336
Number of extensions: 4252
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)