Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00902
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf (tbp-asso... 31 0.90
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical ... 30 2.1
U22184-1|AAA64847.1| 348|Caenorhabditis elegans Wnt protein pro... 29 3.6
U22179-1|AAA64846.1| 348|Caenorhabditis elegans Wnt protein pro... 29 3.6
AC006627-1|AAK85460.1| 348|Caenorhabditis elegans Abnormal cell... 29 3.6
U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor staphylo... 28 6.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.4
AF067215-5|AAC17010.3| 441|Caenorhabditis elegans T box family ... 28 8.4
>AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 2
protein.
Length = 1086
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 593 TSFYQTWACRTSLFNCKTSPNLTHGTLPCLFKMSQN-*NEIRVLNHKFDFYLSV 751
T+ Y R +L+N S H LPC ++ +N N++RVL +F + L++
Sbjct: 827 TNRYSDDFYRAALYNSLASSVFPHDALPCHVELPENLSNDVRVLIKEFTYALNM 880
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +2
Query: 44 HSPQLQAFQLQNKREQHR*QPSHHSAYLHHSEVRRAQCPLDILGPTQDVY*NGQIRHCPE 223
H Q Q Q Q++++Q + HH A HHS+ Q P P+QD + + R
Sbjct: 666 HERQQQERQQQDRQQQAQ---QHHQAQQHHSQ----QHPAQPAQPSQDHHEEHRRRLEEH 718
Query: 224 RRRE 235
RRRE
Sbjct: 719 RRRE 722
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +2
Query: 44 HSPQLQAFQLQNKREQHR*QPSHHSAYLHHSEVRRAQCPLDILGPTQDVY*NGQIRHCPE 223
H Q Q Q Q++++Q + HH A HHS+ Q P P+QD + + R
Sbjct: 666 HERQQQERQQQDRQQQAQ---QHHQAQQHHSQ----QHPAQPAQPSQDHHEEHRRRLEEH 718
Query: 224 RRRE 235
RRRE
Sbjct: 719 RRRE 722
>AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical
protein Y59A8B.6 protein.
Length = 968
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Frame = +1
Query: 565 PSSSATSLQDFILPNMG--LQDIT---IQLQNVTEPNPRNPP 675
P T +Q I+P MG LQDI + L++V E NPR+PP
Sbjct: 296 PKGYLTDMQS-IIPQMGGDLQDIKKARMLLKSVRETNPRHPP 336
>U22184-1|AAA64847.1| 348|Caenorhabditis elegans Wnt protein
protein.
Length = 348
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 327 ATNSLPSITAAAAG-LSTCSCPRALKPACPSNCL 425
ATN +P+I+ A AG + P LK CPS+ L
Sbjct: 25 ATNEIPTISGAPAGKIVQPPKPNILKQGCPSDLL 58
>U22179-1|AAA64846.1| 348|Caenorhabditis elegans Wnt protein
protein.
Length = 348
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 327 ATNSLPSITAAAAG-LSTCSCPRALKPACPSNCL 425
ATN +P+I+ A AG + P LK CPS+ L
Sbjct: 25 ATNEIPTISGAPAGKIVQPPKPNILKQGCPSDLL 58
>AC006627-1|AAK85460.1| 348|Caenorhabditis elegans Abnormal cell
lineage protein 44,isoform a protein.
Length = 348
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 327 ATNSLPSITAAAAG-LSTCSCPRALKPACPSNCL 425
ATN +P+I+ A AG + P LK CPS+ L
Sbjct: 25 ATNEIPTISGAPAGKIVQPPKPNILKQGCPSDLL 58
>U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor
staphylococcal nuclease homologprotein 1 protein.
Length = 914
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 580 TSLQDFILPNMGLQDITIQLQNVTEPNPRNP 672
++++ F+LPN + IT+QL V P+ RNP
Sbjct: 206 STVRAFLLPNF--EYITLQLSGVRAPSTRNP 234
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 53 QLQAFQLQNKREQHR*QPSHHSAYLHHSEVRRAQCP 160
QLQ Q +++Q +P H S++ HH E RR + P
Sbjct: 184 QLQQQHHQQQQQQLAFRPRHRSSH-HHQEPRRHRAP 218
>AF067215-5|AAC17010.3| 441|Caenorhabditis elegans T box family
protein 32 protein.
Length = 441
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 235 FSPAFRTVTNLSISIHILRWSENIQGTLRSSNFGVMK 125
+ P R T+ IS+ + WS+ T+ SSN V +
Sbjct: 144 YVPVLRFTTSSGISLEVTVWSQKFVTTMTSSNRSVKR 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,393,269
Number of Sequences: 27780
Number of extensions: 408371
Number of successful extensions: 1056
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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