Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00901X
         (502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    25   1.1  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   2.5  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   3.3  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    23   4.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   5.8  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   7.7  

>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +3

Query: 312 PTGFPSCLWTTATLPVTSDTAALKLLPSARGRSVR--GALQTSPGL 443
           P  FP+   TT TL  TS TAA     ++   SV     + TS GL
Sbjct: 31  PWSFPALSPTTTTLATTSGTAASSGASNSSNVSVAIGNRVNTSTGL 76


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 339 STDTTGILLGICSPLLWPLL 280
           S +  G+LL +C PLL P L
Sbjct: 411 SINLAGVLLRLCQPLLKPQL 430


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
 Frame = +3

Query: 75   SEPDYHTNEDLLYPYSPIPYFGMYHLVK-IPIGRG-LVHHVDYWGEGKVTNLDRVRGFRR 248
            S P    NE+ + P SP P     HLV+ + +G G LV  ++    G  ++         
Sbjct: 1042 SWPKGTENENYMVPPSPRPVSEELHLVRGVRLGSGTLVGALNRCSNGSCSSTSSSHSNHS 1101

Query: 249  SYM*TNSLRSSVRATARESKYPTGFPSCLWTTATLPVTSDTAALKLLPSARGRSVR--GA 422
            S+  ++S  +S  + A   K  + +   +   + +PV +  A    +P+A     +    
Sbjct: 1102 SH--SSSSSNSAGSWAGMGKQESHY---VMYPSNVPVFAGGAEYMNVPAAVTHHTKEDER 1156

Query: 423  LQTSPGLSTPPKDSSLPT 476
            +   P L   P D+  PT
Sbjct: 1157 MTARPKLGRTPSDTGGPT 1174


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 58  KNGKPPLSQTTTQMRTCCIHTPQY 129
           +NG PPL Q    M T  +  PQ+
Sbjct: 140 ENGSPPLDQMGHHMGTAQMTIPQH 163


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -3

Query: 275  AQTVRSHVAPTKASYPVKVSHFSFSPVIDVVYQPSTNRYLHEVVHTE 135
            A+  RS  A    S   K  H S SP+  ++  P  NR   +  HTE
Sbjct: 1456 ARLARSSPASPTPSKKSK-RHQSASPIRHILNSPLLNRRQRKKQHTE 1501



 Score = 22.6 bits (46), Expect = 7.7
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 469  NDESFGGVDNPGDVCSAPRTDRPRADGN 386
            ++ES  G ++ G   ++ +TD PR  G+
Sbjct: 1398 SNESTDGGESMGTASTSSQTDEPRPGGS 1425


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = -1

Query: 400 RADGNSFNAAVSDVTGSVAVVHR---HDGNPVGYLLSLAVALTDER 272
           RAD N F  +  DVT + +V+ R    D +  G+ +     L+D R
Sbjct: 167 RADTNRFPPSRPDVTFASSVISRLDPRDDSARGWRVPDVATLSDHR 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,865
Number of Sequences: 2352
Number of extensions: 13667
Number of successful extensions: 53
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)