Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00900
(741 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 124 1e-29
SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces po... 120 2e-28
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 27 2.8
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 2.8
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 27 3.7
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 26 4.9
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 26 4.9
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 26 6.5
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 26 6.5
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 26 6.5
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 25 8.6
SPAC30D11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 8.6
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 25 8.6
SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22 |Schiz... 25 8.6
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 124 bits (299), Expect = 1e-29
Identities = 58/86 (67%), Positives = 71/86 (82%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 NLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLG 429
NLLSVAYKN++GARR+SWR+ISSIEQK E G+ R+ + KEYR K+E EL +IC+DVL
Sbjct: 44 NLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLS 103
Query: 430 LLDKHLIPKASNPESKVFYLKMKGDY 507
+L+KHLIP A+ ESKVFY KMKGDY
Sbjct: 104 VLEKHLIPAATTGESKVFYYKMKGDY 129
Score = 98.7 bits (235), Expect = 8e-22
Identities = 46/77 (59%), Positives = 58/77 (75%)
Frame = +3
Query: 510 RYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPD 689
RYLAE GE + S +AY+ A +I+ A++ PT P+RLGLALNFSVFYYEIL+SP+
Sbjct: 131 RYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPE 190
Query: 690 KACQLAKQAFDDAIAEL 740
AC LAKQ FD+AI+EL
Sbjct: 191 SACHLAKQVFDEAISEL 207
Score = 42.7 bits (96), Expect = 5e-05
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +2
Query: 128 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 256
MS +E V AKLAEQAERY++M MK+V + +LS EER
Sbjct: 1 MSNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEER 43
>SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 120 bits (290), Expect = 2e-28
Identities = 56/86 (65%), Positives = 71/86 (82%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 NLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLG 429
NLLSVAYKNV+GARR+SWR++SSIEQK E G+ + ++ KEYR K+E+EL IC D+L
Sbjct: 45 NLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILT 104
Query: 430 LLDKHLIPKASNPESKVFYLKMKGDY 507
+L+KHLIP A++ ESKVFY KMKGDY
Sbjct: 105 VLEKHLIPNAASAESKVFYYKMKGDY 130
Score = 112 bits (270), Expect = 4e-26
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = +3
Query: 510 RYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPD 689
RYLAE A GE R + S + Y+ A EI+ A++ PTHPIRLGLALNFSVFYYEILNSPD
Sbjct: 132 RYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPD 191
Query: 690 KACQLAKQAFDDAIAEL 740
+AC LAKQAFD+AI+EL
Sbjct: 192 RACYLAKQAFDEAISEL 208
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2
Query: 131 SVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 256
+ +E+ V AKLAEQAERY+ M MK V T EL+ EER
Sbjct: 3 TTSREDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEER 44
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1207
Score = 27.1 bits (57), Expect = 2.8
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 510 RYLAEVATG-ETRHSVVEDSQKAYQDAFEISKAKMQPTHP-IRLGLALNFS 656
RY+ ++ E R ED+++A + ++ + A +QP H I L LA+N S
Sbjct: 1049 RYIVALSCELERRRLGEEDTKRALELSYYFASADLQPMHSIIALRLAINAS 1099
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 334 KTEGSERKQQMAKEYRVKVEKELREI-CYDVLGLLDKHLIPKASNPESKVFYLKMKGDYS 510
K +G RK ++ R E LR C+ + +L + PES+ +YL++K
Sbjct: 1476 KLQGRARKTELHGFIRANAEMVLRSPECF--IKILKDCCVLGHFTPESEHYYLELKESLP 1533
Query: 511 GTLQ 522
G LQ
Sbjct: 1534 GVLQ 1537
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 277 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVE 393
KN+ S+ R +SS + K +E + M +Y K+E
Sbjct: 350 KNLENDEESTLRALSSFQSKIRNAEDEDVMDSQYGSKIE 388
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 331 QKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 456
+K + + KEY K +++LR+ D+ LL KH I +
Sbjct: 328 EKQRSKDEYASLYKEYTRKEQEKLRKQNDDLQNLLSKHRISR 369
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 160 TLHQFFLVDGHRGRWKRTNSLMPELLKPAVLE 65
TL FL DG RWK + P V+E
Sbjct: 52 TLKDEFLADGLESRWKTNGEKSSSIRYPLVME 83
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 265 SVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKE 399
S +Y + G S W+ I ++ K+ G +R ++ Y +KE
Sbjct: 61 SFSYPFLKGKSDSPWQAIQLLDFKSSGQQRAAYYSERYHSFRDKE 105
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 6.5
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Frame = +1
Query: 310 RVISSIEQKTEGSERKQQMAKEYRVKVEKE-LREICYDVLGL--LDKHL---IPKASNPE 471
+V+SS + E S + + R E E L E+ +V L +D+ +P+ NP
Sbjct: 263 KVLSSSSEDDESSSPEDLLKPIIRSTEEMENLNELEQEVQDLDPIDEGFEEKVPRFRNPS 322
Query: 472 SKVFYLKMKG----DYSGTLQKWPQEKPDILL 555
K FY K+ YS L+ EK D L+
Sbjct: 323 KKAFYEKLHSLRNRSYS-KLESLTSEKSDTLI 353
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 25.8 bits (54), Expect = 6.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 39 EIKKK*CLHSKTAGFNNSGISELVLFHRPRCPSTRKNWCNVPNWPNKLSDM 191
++K+ + S F N S+ + F +PR K N WPN+ S +
Sbjct: 50 QLKELDLVVSSNKEFLNEKTSDQISFLKPRETVVEKKLANGSIWPNETSHL 100
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 8.6
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 265 SVAYKNVVGARRSSWRVISSIEQKTEGSE---RKQQMAKEYRVKVEKELR 405
SV+ + +R S+ S E + E SE R+Q++ +E R + EK+LR
Sbjct: 358 SVSSEERSRSRAGSFSHHSESENEDEDSEAFRRRQELRRERRRQAEKDLR 407
>SPAC30D11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 85
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 620 CGLHFRLADFKSILVCFL*ILYNRMSGFSCGHFC 519
C L+F L + K+ L+ I+Y + GFS H C
Sbjct: 46 CLLNFSLRENKNYLI----IVYLPIEGFSANHMC 75
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 8.6
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 349 ERKQQMAKEYRVKVEKELREICYDV--LGLLDKHLIPKASNPE 471
E++Q A +YR+KVE+ +I V + L+ L + SNPE
Sbjct: 85 EQEQNEANDYRLKVERLEHKISDYVQEINSLNSQLQIQKSNPE 127
>SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 526
Score = 25.4 bits (53), Expect = 8.6
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 209 MKEVTETGVELSNEERTSFQLLIRMS*VPDGHHGVSFP---QLNRKPRVQKENSKWQKNI 379
+ ++ E + S+++ S L R+S PD H GV P L ++K K KN
Sbjct: 64 VNQLNELDLNDSSDQLDSRPSLRRVSSAPDSHKGVEAPPPRPLINMSNIRKAQVKILKNP 123
Query: 380 G 382
G
Sbjct: 124 G 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,092,500
Number of Sequences: 5004
Number of extensions: 63152
Number of successful extensions: 199
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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