Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00899
         (767 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL353779-1|CAI20975.1|  250|Homo sapiens chromosome 1 open readi...    30   7.9  
AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens ...    30   7.9  
AF005081-1|AAB83961.1|  112|Homo sapiens skin-specific protein p...    30   7.9  

>AL353779-1|CAI20975.1|  250|Homo sapiens chromosome 1 open reading
           frame 68 protein.
          Length = 250

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +1

Query: 337 STSLCCLALRCYG---LRCHRTRRAQCECESSKCC 432
           STS CCLA R +G   LR    R   C   SS CC
Sbjct: 167 STSYCCLAPRTFGVSPLRRWIQRPQNCNTGSSGCC 201


>AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12547 fis, clone NT2RM4000634. ).
          Length = 307

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 678 VVVFCCRTACKFVCMCLCVV*H 743
           V V  C   C FVC+CLCV  H
Sbjct: 179 VCVCACVCGCTFVCVCLCVWVH 200


>AF005081-1|AAB83961.1|  112|Homo sapiens skin-specific protein
           protein.
          Length = 112

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +1

Query: 337 STSLCCLALRCYG---LRCHRTRRAQCECESSKCC 432
           STS CCLA R +G   LR    R   C   SS CC
Sbjct: 37  STSYCCLAPRTFGVSPLRRWIQRPQNCNTGSSGCC 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,204,535
Number of Sequences: 237096
Number of extensions: 1940065
Number of successful extensions: 5145
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5103
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)