Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00899
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70271-1|CAB61041.1|  393|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AF103732-1|AAD03603.1|  393|Caenorhabditis elegans Wnt homolog p...    30   2.1  
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p...    29   2.8  
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos...    29   2.8  

>Z70271-1|CAB61041.1|  393|Caenorhabditis elegans Hypothetical
           protein W08D2.1 protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +1

Query: 328 SSDSTSLCCLALRCYGLRCHRTRRAQCECESSKCCTY*CPFGSSIADVH 474
           SS+S  L C   R Y  R    R+ QCEC+   CC   C   +    VH
Sbjct: 344 SSESCDLLCCG-RGYNTRLE-IRQTQCECKFVWCCEVKCKTCTEEVAVH 390


>AF103732-1|AAD03603.1|  393|Caenorhabditis elegans Wnt homolog
           protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +1

Query: 328 SSDSTSLCCLALRCYGLRCHRTRRAQCECESSKCCTY*CPFGSSIADVH 474
           SS+S  L C   R Y  R    R+ QCEC+   CC   C   +    VH
Sbjct: 344 SSESCDLLCCG-RGYNTRLE-IRQTQCECKFVWCCEVKCKTCTEEVAVH 390


>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
           protein F20G4.3 protein.
          Length = 2003

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -3

Query: 729 TDTYRQTCMRYDNKKLQLKMHCFNSVSFLSYKKPYL 622
           T+++ Q C+ Y N+KLQ     FN+  F+  ++ YL
Sbjct: 481 TNSFEQLCINYTNEKLQ---QLFNNTMFVREQQEYL 513


>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical
           protein F20G4.3 protein.
          Length = 2003

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -3

Query: 729 TDTYRQTCMRYDNKKLQLKMHCFNSVSFLSYKKPYL 622
           T+++ Q C+ Y N+KLQ     FN+  F+  ++ YL
Sbjct: 481 TNSFEQLCINYTNEKLQ---QLFNNTMFVREQQEYL 513


>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
           heavy chain II protein.
          Length = 2003

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -3

Query: 729 TDTYRQTCMRYDNKKLQLKMHCFNSVSFLSYKKPYL 622
           T+++ Q C+ Y N+KLQ     FN+  F+  ++ YL
Sbjct: 481 TNSFEQLCINYTNEKLQ---QLFNNTMFVREQQEYL 513


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,049,330
Number of Sequences: 27780
Number of extensions: 308267
Number of successful extensions: 806
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)