Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00899
         (767 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.59 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   4.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   7.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.5  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 716 LYVSVCSVAWVCNSRW 763
           ++ ++CS  W+C  RW
Sbjct: 369 IHDNICSNGWICEHRW 384


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 603 SITTDFTKTLKRACADLPCHRV 538
           SIT + T  +K+ C D P  R+
Sbjct: 589 SITRNATALIKKLCRDNPAERL 610


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 748 NPCYTTHRHIQTNL 707
           N  YT+H+H++T+L
Sbjct: 120 NNHYTSHQHLRTHL 133


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 733 THRHIQTNLHAVRQQKTTTK 674
           +H H+ TNL A+R++    K
Sbjct: 460 SHYHLYTNLTALRKRDVLKK 479


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,760
Number of Sequences: 438
Number of extensions: 3250
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)