Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00898
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071203-1|AAL48825.1|  157|Drosophila melanogaster RE24457p pro...    93   2e-19
AE014298-1419|AAF46561.1|  157|Drosophila melanogaster CG2968-PA...    93   2e-19

>AY071203-1|AAL48825.1|  157|Drosophila melanogaster RE24457p
           protein.
          Length = 157

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 49/97 (50%), Positives = 63/97 (64%)
 Frame = +1

Query: 229 FWYLXXXXXXLAVLRPGVVTILENDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESID 408
           F  L      LAVL+PGVV ++ENDGK  K FVSSG++TVN+DSSVQVLAEEAH +E ID
Sbjct: 56  FGILAKHVPTLAVLKPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDID 115

Query: 409 RSAAQEALSKAQSEFXXXXXXXXXXXXXIALEVVKRL 519
            + A++ L+K QS+              IA+EV + L
Sbjct: 116 ANEARQLLAKYQSQLSSAGDDKAKAQAAIAVEVAEAL 152



 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/53 (66%), Positives = 39/53 (73%)
 Frame = +2

Query: 92  ARRLQVRNYADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKH 250
           AR  Q R+Y+D     EM LTFAA NK FYD  VV+QIDVPSFSG+FGIL KH
Sbjct: 15  ARLAQNRSYSD-----EMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKH 62


>AE014298-1419|AAF46561.1|  157|Drosophila melanogaster CG2968-PA
           protein.
          Length = 157

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 49/97 (50%), Positives = 63/97 (64%)
 Frame = +1

Query: 229 FWYLXXXXXXLAVLRPGVVTILENDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESID 408
           F  L      LAVL+PGVV ++ENDGK  K FVSSG++TVN+DSSVQVLAEEAH +E ID
Sbjct: 56  FGILAKHVPTLAVLKPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDID 115

Query: 409 RSAAQEALSKAQSEFXXXXXXXXXXXXXIALEVVKRL 519
            + A++ L+K QS+              IA+EV + L
Sbjct: 116 ANEARQLLAKYQSQLSSAGDDKAKAQAAIAVEVAEAL 152



 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/53 (66%), Positives = 39/53 (73%)
 Frame = +2

Query: 92  ARRLQVRNYADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKH 250
           AR  Q R+Y+D     EM LTFAA NK FYD  VV+QIDVPSFSG+FGIL KH
Sbjct: 15  ARLAQNRSYSD-----EMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKH 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,703,636
Number of Sequences: 53049
Number of extensions: 431150
Number of successful extensions: 824
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)