Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00895
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf (tbp-asso... 30 1.1
U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor staphylo... 28 4.3
AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical ... 28 4.3
AL110482-6|CAB60339.1| 179|Caenorhabditis elegans Hypothetical ... 28 5.7
Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical p... 27 7.5
L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-lik... 27 7.5
L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-lik... 27 7.5
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 27 7.5
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut... 27 7.5
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF077534-8|AAC26287.1| 312|Caenorhabditis elegans Proteasome re... 27 9.9
>AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 2
protein.
Length = 1086
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 280 TSFYQTWACRTSLFNCKTSPNLTHGTLPCQFKMSQN-*NEIRILNHKFDF 426
T+ Y R +L+N S H LPC ++ +N N++R+L +F +
Sbjct: 827 TNRYSDDFYRAALYNSLASSVFPHDALPCHVELPENLSNDVRVLIKEFTY 876
>U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor
staphylococcal nuclease homologprotein 1 protein.
Length = 914
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 267 TSLQDFILPNMGLQDITIQLQNVTEPNPRNP 359
++++ F+LPN + IT+QL V P+ RNP
Sbjct: 206 STVRAFLLPNF--EYITLQLSGVRAPSTRNP 234
>AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical
protein Y59A8B.6 protein.
Length = 968
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +3
Query: 267 TSLQDFILPNMG--LQDIT---IQLQNVTEPNPRNPP 362
T +Q I+P MG LQDI + L++V E NPR+PP
Sbjct: 301 TDMQS-IIPQMGGDLQDIKKARMLLKSVRETNPRHPP 336
>AL110482-6|CAB60339.1| 179|Caenorhabditis elegans Hypothetical
protein Y39G8B.7 protein.
Length = 179
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +2
Query: 56 PSTCS-CPRALKPACPSNCSLCYP 124
P TC+ CP A P SNC C P
Sbjct: 99 PETCNMCPGATTPTPDSNCKDCSP 122
>Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 56 PSTCSCPRALKPACPSNCSLCYPT 127
P T +CP + P+C + C Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220
>Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 56 PSTCSCPRALKPACPSNCSLCYPT 127
P T +CP + P+C + C Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220
>L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 56 PSTCSCPRALKPACPSNCSLCYPT 127
P T +CP + P+C + C Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220
>L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 56 PSTCSCPRALKPACPSNCSLCYPT 127
P T +CP + P+C + C Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 217 PDRRAMGFPFDRPQAAPPASRTSFYQTWACRTSLFNCKTSPNLTH 351
PD++ +G PF+R P TS ++A N L H
Sbjct: 931 PDKQPVGLPFNRKNYQPSIGETSSLNSFAVVDRSINSSAPLTLIH 975
>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cuticle
protein 3 protein.
Length = 1497
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 217 PDRRAMGFPFDRPQAAPPASRTSFYQTWACRTSLFNCKTSPNLTH 351
PD++ +G PF+R P TS ++A N L H
Sbjct: 931 PDKQPVGLPFNRKNYQPSIGETSSLNSFAVVDRSINSSAPLTLIH 975
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 17 TTSLPSITAAAAGPSTCSCPRALKPACPSNC 109
TT P A SCP+ +P C S C
Sbjct: 505 TTQAPPAPAPQQQQQLASCPQLCQPQCTSQC 535
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +1
Query: 130 DLDRIDQDDGKQLTCVEASSFCGLKDK--KYPDRRAMGFPFDRPQAAP---PASRTS 285
+LD ID D + T E S F L KYP + A F + + +P P SR +
Sbjct: 787 ELDHIDSDTADETTKSEKSPFGSLNKSSIKYPIKNAPEFSENHSRVSPVPVPPSRNA 843
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +1
Query: 130 DLDRIDQDDGKQLTCVEASSFCGLKDK--KYPDRRAMGFPFDRPQAAP---PASRTS 285
+LD ID D + T E S F L KYP + A F + + +P P SR +
Sbjct: 792 ELDHIDSDTADETTKSEKSPFGSLNKSSIKYPIKNAPEFSENHSRVSPVPVPPSRNA 848
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +1
Query: 130 DLDRIDQDDGKQLTCVEASSFCGLKDK--KYPDRRAMGFPFDRPQAAP---PASRTS 285
+LD ID D + T E S F L KYP + A F + + +P P SR +
Sbjct: 802 ELDHIDSDTADETTKSEKSPFGSLNKSSIKYPIKNAPEFSENHSRVSPVPVPPSRNA 858
>AF077534-8|AAC26287.1| 312|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 11 protein.
Length = 312
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 236 DSRSTDLKQRH-QPPGLHSTKHGLAGHHYSIAKRHRT 343
+ R T H Q P + + HGL H+YSI +RT
Sbjct: 175 EPRQTTSNLGHLQKPSIQALIHGLNRHYYSIPIAYRT 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,872,690
Number of Sequences: 27780
Number of extensions: 273362
Number of successful extensions: 686
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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