Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00894
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z92822-9|CAL49448.1| 576|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z82094-5|CAL49446.1| 576|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 32 0.38
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 32 0.38
Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z82282-9|CAB05281.2| 361|Caenorhabditis elegans Hypothetical pr... 29 2.7
U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical p... 29 3.5
Z68009-3|CAA92005.1| 817|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 27 8.1
AC006656-1|AAF39881.1| 592|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
protein T20G5.5 protein.
Length = 1234
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 189 LATDEEVERRARHERDRQLLHQTL-FLFEIVKVDDITFWSKNSPSKLFKLMVSRLHEV 359
LA DE++ER+ ER+R+L + FLF I + + S L + +VSR+ +
Sbjct: 150 LAKDEDIERKMERERERELSRSLIHFLFRITSNLFVFILFGSCSSLLMERIVSRVRRL 207
>Z92822-9|CAL49448.1| 576|Caenorhabditis elegans Hypothetical
protein ZK520.3b protein.
Length = 576
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 142 NQERLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 255
NQ RLL+ N+ A+R++++ R +G +A +F+K
Sbjct: 164 NQVRLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 201
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical protein
ZK520.3a protein.
Length = 1383
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 142 NQERLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 255
NQ RLL+ N+ A+R++++ R +G +A +F+K
Sbjct: 971 NQVRLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 1008
>Z82094-5|CAL49446.1| 576|Caenorhabditis elegans Hypothetical
protein ZK520.3b protein.
Length = 576
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 142 NQERLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 255
NQ RLL+ N+ A+R++++ R +G +A +F+K
Sbjct: 164 NQVRLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 201
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical protein
ZK520.3a protein.
Length = 1383
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 142 NQERLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 255
NQ RLL+ N+ A+R++++ R +G +A +F+K
Sbjct: 971 NQVRLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 1008
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 142 NQERLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 255
NQ RLL+ N+ A+R++++ R +G +A +F+K
Sbjct: 971 NQVRLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 1008
>Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical
protein F21C3.6 protein.
Length = 186
Score = 30.7 bits (66), Expect = 0.87
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 576 DHSQSRERI-FSLYSFSSEFVKRYPLPEDSHPAAAGSRLRAS 454
D+ +SR I LY+ S++F++ + E SH AAG RLR+S
Sbjct: 108 DYRESRNAIKVQLYTDSNDFIQTQQI-EKSHFNAAGDRLRSS 148
>Z82282-9|CAB05281.2| 361|Caenorhabditis elegans Hypothetical
protein T07G12.12 protein.
Length = 361
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 386 EIREFPANEDLVQARHHQLEQFRRTVLAPKRDVVNFDYFKQ 264
E + P N+D++ ++ R TV+ P R FDY +
Sbjct: 171 EYQSLPPNDDVIMNETELMDVDRTTVMTPLRSPTFFDYHNE 211
>U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical
protein F25B5.2 protein.
Length = 757
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 355 RSSLAGNSLISGTESTISFGTSDAMY*TV 441
R++L GNS IS +I+ GTSD Y T+
Sbjct: 442 RNTLTGNSSISSGVGSIASGTSDQGYGTI 470
>Z68009-3|CAA92005.1| 817|Caenorhabditis elegans Hypothetical
protein R09A8.3 protein.
Length = 817
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 516 KRYPLPEDSHPAAAGSRLRASTSPRNCSVHCV*RSKGDCALGS 388
KR P P DS AA SRL + T + + C+ S C++G+
Sbjct: 470 KREPCPVDSQKAALLSRLISCTGKQQKPLECM--SAPRCSIGA 510
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -2
Query: 392 VPEIREFPA-NEDLVQARHHQLEQFRRTVLAP---KRDVVNFDYFKQKQCLM 249
+PE+REFP +++ V+A L++ + AP + + D K+CL+
Sbjct: 851 IPELREFPTFSDEFVKAYKDTLKKDAPLICAPLLKLPETIKSDELDDKECLV 902
>AC006656-1|AAF39881.1| 592|Caenorhabditis elegans Hypothetical
protein H12I13.1 protein.
Length = 592
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 113 SSVLLAASLFGLPTSCQVPLRQFGGICRY 27
S+V+ + G+ +P + FGGICRY
Sbjct: 31 SAVMPKRKMNGISAYADMPKKIFGGICRY 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,586,926
Number of Sequences: 27780
Number of extensions: 277519
Number of successful extensions: 973
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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