Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00891
(768 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.32
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 0.55
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 27 3.0
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 3.0
SPBPB21E7.07 |aes1|SPAPB21E7.07, SPAPB21E7.07|enhancer of RNA-me... 27 3.0
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 27 3.0
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 27 3.9
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 26 5.2
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 26 5.2
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 26 5.2
SPAC20G8.01 |cdc17||ATP-dependent DNA ligase Cdc17|Schizosacchar... 26 6.8
SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr 1||... 26 6.8
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 6.8
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 25 9.0
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 9.0
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 25 9.0
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.3 bits (65), Expect = 0.32
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +1
Query: 241 NVNEHLRSSVRATTRESKYPTGSPSCLWT--TATLPVTSETTASKLLPSARGRSLSGALQ 414
N N +S TT S PTG S L T T T+P TS ++ S +P S
Sbjct: 161 NSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSS 220
Query: 415 TSPGLSTR-PKDSSLPTDILKILTT 486
P ST +S+PT L+T
Sbjct: 221 PLPTTSTSCTTSTSIPTGGSSSLST 245
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.5 bits (63), Expect = 0.55
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 SSVRATTRESKYPTGSPSCLWTTATLPVT-SETTASKLLPSARGRSLSGALQTSPGLSTR 438
SS +TT +S T + S L T + P+T S + S LP+ SLS ++ T
Sbjct: 291 SSQDSTTIDSTPSTIATSTLQPTTSSPITTSAPSLSSALPTTYPSSLSTEVEVEYFTKTI 350
Query: 439 PKDSSLPTDILKILTTFKISSVT 507
SS+ T + T ++ ++T
Sbjct: 351 TDTSSIVTYSTGVETLYETETIT 373
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 71 DYDTNEDLLYAYSPIPYFGMYHLVKIPIDRGLVHHVDYWG 190
++ T ++ + A+ P+ Y G + L +P D+ +H+ D G
Sbjct: 311 EFGTWDNGIKAFIPMEYVGTHLLDGVPPDKSCIHNYDNAG 350
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.1 bits (57), Expect = 3.0
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 YNVNEHLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPS-ARGRSLSGALQ 414
YN + L SSV ++ S S + +T+T S ++ S PS + + +G+
Sbjct: 223 YNTSSFLPSSVISSASLSSSSVLPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTT 282
Query: 415 T--SPGLSTRP---KDSSLPTDILKILTTFKISS 501
T S +S+ P S +PT + +++F SS
Sbjct: 283 TTGSATVSSSPFYSNSSVIPTSVPSSVSSFTSSS 316
>SPBPB21E7.07 |aes1|SPAPB21E7.07, SPAPB21E7.07|enhancer of
RNA-mediated gene silencing |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 296
Score = 27.1 bits (57), Expect = 3.0
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +1
Query: 346 TSETTASKLLPSARGRSLSGALQTSPG--LSTRPK--DSSLP--TDILKILTTFKISSVT 507
TSET S++ +A G L+ + Q SP + PK LP TD+L ++ F+ S
Sbjct: 134 TSETAISEV-ENALGIPLNYSSQVSPPVLIDDGPKWLVIQLPNATDVLNLVPKFQSLSQV 192
Query: 508 CKNGLYYG 531
CKN + G
Sbjct: 193 CKNNDWIG 200
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 71 DYDTNEDLLYAYSPIPYFGMYHLVKIPIDRGLVHHVDYWG 190
++ T ++ + A+ P+ Y G + L +P D+ +H+ D G
Sbjct: 311 EFGTWDNGIKAFIPMEYVGTHLLDGVPPDKSCIHNYDNAG 350
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 193 RKVTNLDKIRGFPRSYNVNEHLRSSVRAT 279
+K LDK+RGF + +EH R+ ++ T
Sbjct: 1606 KKSAPLDKLRGFMKYQRRSEHYRNPLKRT 1634
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 26.2 bits (55), Expect = 5.2
Identities = 20/105 (19%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 232 RSYNVNEHLRSSVRATTRESKYPTGSP--SCLWTTATLPVTSETTASKLLPSARGRSLSG 405
+S + + L +S +T+ + P S + + +T+P TS + P++ +
Sbjct: 78 KSLSSSSILSNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVPTTSSTPTSSSILSNS 137
Query: 406 ALQTSPGLSTRPKDSSLPTDILKILTTFKISSVTCKNGLYYGAGY 540
+ +S +S +++ + + TTF S+ + AGY
Sbjct: 138 TIPSSSSISASTITTTIISGSTQFTTTFVDQSIDTVEVVIPTAGY 182
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 357 DSVKTVTISTGPITKRCAADVARIVNASEGLVVAYGYSENSDDIQNL 497
DS + T G I +V RI+N +AYG SD +N+
Sbjct: 154 DSQRAATKDAGAIA---GLNVLRIINEPTAAAIAYGLDAKSDKPKNV 197
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 5.2
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Frame = +1
Query: 274 ATTRESKYPTGSPS-CLWTTATLPVTSETTASKLLPSARG----RSLSGALQTSPGLSTR 438
A++ E P GS C T+ + T E S P+A S L + S+
Sbjct: 202 ASSLEPSSPLGSEDECHPPTSDMQPTHELNESPSTPTAPDFPHYNSSPSELSPTQRRSSI 261
Query: 439 PKDSSLPTDILKILTTFKISSVTCKNGLYYGAGYELPADLKT 564
P+ +LK LT++ + C+ L++ + + L +
Sbjct: 262 SNGKDAPSPVLKDLTSYTQEVIVCRKFLHHSLSPSIHSTLSS 303
>SPAC20G8.01 |cdc17||ATP-dependent DNA ligase
Cdc17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 768
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 394 SLSGALQTSPGLSTRPKDSSLPTDILKILTTFKISSVTCK 513
+L + +PG+ T+P + I ++L TF ++ TC+
Sbjct: 375 TLRETCKLTPGIPTKPMLAKPTKQISEVLNTFDQAAFTCE 414
>SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr
1|||Manual
Length = 408
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 159 LSIGIFTRWYIPK*GIGEYAYNR 91
LSI F +WY+ I E+ Y R
Sbjct: 13 LSISFFLQWYLANTWIAEFLYRR 35
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 6.8
Identities = 21/87 (24%), Positives = 36/87 (41%)
Frame = +1
Query: 256 LRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPGLST 435
+ SS A++ + S S ++ T+ TT++ SA SLS ++ S+
Sbjct: 134 ITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSS 193
Query: 436 RPKDSSLPTDILKILTTFKISSVTCKN 516
SSL + T+ +SS N
Sbjct: 194 SLASSSLNSTTSATATSSSLSSTAASN 220
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/71 (19%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 244 VNEHLRSSVRATTRE-SKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTS 420
++ H S+ T+ + S + S S ++++++P+T+ +++ +PS+ +++S + T+
Sbjct: 63 ISTHTSSATNTTSGQLSISSSSSTSSEYSSSSIPITTVSSSDSFIPSS-SQTISASSSTT 121
Query: 421 PGLSTRPKDSS 453
+ SS
Sbjct: 122 DNVIVSSSISS 132
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 9.0
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +1
Query: 235 SYNVNEHLRSSVRATTRESKYPTGSPSC------LWTTATLPVTSETTASKLLPSARGRS 396
S+NVN SS + T S TGS S + ++T+ TS + S ++ G S
Sbjct: 635 SFNVNSVGPSSSQTTPTSSSSITGSQSLKETSSPAYVSSTVSYTSSSVDSSSTYNSTGSS 694
Query: 397 LSGALQTSPGLSTRPKDSSLPTDILKILTT 486
S + Q+ G + +++ +++ IL++
Sbjct: 695 SSDS-QSFSGTTYSDPTTTITSEVSSILSS 723
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 373 LPSARGRSLSGALQTSPGLSTRPKDSSLPTDILKI 477
L S+ S+ + TSP L KD+S +DILK+
Sbjct: 220 LNSSDSASIYSSPYTSPTLEFSKKDASARSDILKM 254
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,797,801
Number of Sequences: 5004
Number of extensions: 55522
Number of successful extensions: 179
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -