Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00891
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            27   0.64 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            27   0.64 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   4.5  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   5.9  
AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    23   7.9  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 187  GRRKVTNLDKIRGFPRSYNVNEHLRSSVRATTRESKYPTG 306
            G     ++D +R FP   ++N H+  +  A  R + + TG
Sbjct: 1444 GSNSTIDVDHLRVFPAQLDLNVHIYDTTLALERSTLHATG 1483


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 187  GRRKVTNLDKIRGFPRSYNVNEHLRSSVRATTRESKYPTG 306
            G     ++D +R FP   ++N H+  +  A  R + + TG
Sbjct: 1445 GSNSTIDVDHLRVFPAQLDLNVHIYDTTLALERSTLHATG 1484


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 559 KTQTAFSTKMVFADATSINNHLYNLVTGGDYINAVKTVRS 678
           +T   F+   V  +   INN     +T G+ + A+K  +S
Sbjct: 419 QTDDTFTCTRVIPEDCEINNGCMEEITSGEILYAIKNSQS 458


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 685 DNQGSDVCRDVVSRLVS 735
           D +GSD+C +VV R V+
Sbjct: 72  DMEGSDICFEVVRRAVA 88


>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +3

Query: 354 DDSVKTVTISTGPITKRCAADVARIVNASEGLVVAYGYSENSDDIQNL 497
           +DS +  T   G I      +V RI+N      +AYG  +N    +N+
Sbjct: 11  NDSQRQATKDAGAIA---GLNVMRIINEPTAAALAYGLDKNLKGERNV 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,933
Number of Sequences: 2352
Number of extensions: 15058
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)