Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00891
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 34 0.097
U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF077529-2|AAC26254.1| 292|Caenorhabditis elegans Hypothetical ... 31 0.68
Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 1.6
AL132904-6|CAD91706.2| 326|Caenorhabditis elegans Hypothetical ... 29 2.8
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 29 2.8
AF067607-12|AAF98615.2| 425|Caenorhabditis elegans Hypothetical... 29 2.8
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 29 2.8
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 4.8
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 29 4.8
Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 28 6.4
AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical ... 28 6.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 8.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 8.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 8.4
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 34.3 bits (75), Expect = 0.097
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = +1
Query: 277 TTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPGLSTRPKDSSL 456
TT +Y T SP+ TT+T P T+ +T P++ + A P +T+P +S
Sbjct: 196 TTERVRYATFSPNIPMTTSTTPTTTTST----FPTSTTEKSTTA---QPSTTTKPTTTSP 248
Query: 457 PTDILK-ILTTFKISSVTCKNGLYYGAGYELPADLKTQTAF-STKMVFADATSINNHLYN 630
PT +K IL + + K P +Q ST+ ++ I N+++
Sbjct: 249 PTTQVKTILPATEAQKIFTKPQYQIWPTTTRPMTSTSQAVISSTEQFIRPSSIIRNNVWK 308
Query: 631 LVT 639
VT
Sbjct: 309 KVT 311
>U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical
protein T26A8.1 protein.
Length = 708
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 SSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARG--RSLSGALQTSPGLST 435
SS +TT + T +PS T T+P T+ + + R +G L TS + T
Sbjct: 339 SSTTSTTTTTTTTTETPSTTVITTTIPSTTSEPEATIDVKTRDSKEDTNGVLPTSSAIET 398
Query: 436 RPKDSSLPTDILKILTTFKISSVT 507
P + P D L + T S T
Sbjct: 399 PPYPENCPEDSLFLPGTIAASEET 422
>AF077529-2|AAC26254.1| 292|Caenorhabditis elegans Hypothetical
protein C09E8.2a protein.
Length = 292
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -2
Query: 587 IFVLNAVWVFKSAGSSYPAP*YKPFLQVTLEILNVVRIFRISVGNDESFGRVDNPGDVCS 408
IF+ + + F + + P ++ FL + I ++ R +G D SFG +NP +V
Sbjct: 5 IFIFSLTFTFSRISADF-TPHFRKFLHDSYGIAITGQLERTDLGMDASFGGKENPTEVPQ 63
Query: 407 APL 399
P+
Sbjct: 64 NPV 66
>Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical
protein C04A11.2 protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/87 (27%), Positives = 41/87 (47%)
Frame = +1
Query: 202 TNLDKIRGFPRSYNVNEHLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPS 381
T+ +R + R+S RA + ++ PTG+P+ T PVT+ T++S + P+
Sbjct: 152 TSTPVVRNILQQLTTPRSARTSTRAASG-NRTPTGTPNM--TRNVRPVTNRTSSSNVSPA 208
Query: 382 ARGRSLSGALQTSPGLSTRPKDSSLPT 462
A Q +PG S+ + PT
Sbjct: 209 A---------QVTPGTSSNHRSRLPPT 226
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +1
Query: 277 TTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPGLSTRPKDSSL 456
TT S+ T + + TT T P T+E + ++ + ++S T+P LS P D +
Sbjct: 192 TTTTSETTTSATTTEETT-TEPSTTEPSTTEEFTTEETTTVSTNPPTTPELSDDPTDGND 250
Query: 457 PTDILKILTTFKISSVTCK 513
TDI + ++SS T +
Sbjct: 251 ATDIDDKIVKKEVSSYTAE 269
>AL132904-6|CAD91706.2| 326|Caenorhabditis elegans Hypothetical
protein Y111B2A.9b protein.
Length = 326
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 103 VLPNTLLRYVPPREDPDRQRAGTPCRLL 186
V P+ L+ PP DP QR+GTP LL
Sbjct: 4 VSPSNLVFPPPPSPDPYTQRSGTPSALL 31
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 229 PRSYNVNEHLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARG 390
PRS N+ S+ TT+ P S + +TAT P T TT + PS+ G
Sbjct: 1276 PRSSRANQSNSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTTTTT---PSSAG 1326
>AF067607-12|AAF98615.2| 425|Caenorhabditis elegans Hypothetical
protein C18H7.1 protein.
Length = 425
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 357 DSVKTVTISTGPITKRCAADVARIVNASEGLVVAYGYSENSDDIQNLERDLQKRLI 524
D +T T +T T D I LV+ +S +D + N +DL KRL+
Sbjct: 212 DKCRTTTTTTTTTTTTTTTDP--ITGCELDLVLVLDFSTTTDPVYNSYKDLSKRLV 265
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 229 PRSYNVNEHLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARG 390
PRS N+ S+ TT+ P S + +TAT P T TT + PS+ G
Sbjct: 1276 PRSSRANQSNSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTTTTT---PSSAG 1326
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +1
Query: 232 RSYNVNEHLR-SSVRATTRESKY---PTGSPSCLWTTATLPVTSETTASKLLPSARGRSL 399
RS N E R SS+R+T+ + P + S ATLP T+ + S++ S+ S
Sbjct: 1364 RSVNEIETNRPSSLRSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSA 1423
Query: 400 SGALQTSPGLST 435
S + +SP ++
Sbjct: 1424 SNSGTSSPAATS 1435
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 4.8
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +1
Query: 229 PRSYNVNEHLRSSVRATTRESKYPTG-SPSCLWTTATL-PVTSET--TASKLLPSARGRS 396
P + V SS TT S T SPS TT+T P TS T ++S PS+ S
Sbjct: 457 PVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASS 516
Query: 397 LSGALQTSPGLSTRPKDSSLPT 462
+ +S ST + SS T
Sbjct: 517 SVSSTASSTQSSTSTQQSSTTT 538
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 4.8
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +1
Query: 229 PRSYNVNEHLRSSVRATTRESKYPTG-SPSCLWTTATL-PVTSET--TASKLLPSARGRS 396
P + V SS TT S T SPS TT+T P TS T ++S PS+ S
Sbjct: 457 PVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASS 516
Query: 397 LSGALQTSPGLSTRPKDSSLPT 462
+ +S ST + SS T
Sbjct: 517 SVSSTASSTQSSTSTQQSSTTT 538
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +1
Query: 232 RSYNVNEHLR-SSVRATTRESKY---PTGSPSCLWTTATLPVTSETTASKLLPSARGRSL 399
RS N E R SS+R+T+ + P + S ATLP T+ + S++ S+ S
Sbjct: 1364 RSVNEIETNRPSSLRSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSA 1423
Query: 400 SGALQTSPGLST 435
S + +SP ++
Sbjct: 1424 SNSGTSSPAATS 1435
>Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical
protein F53F8.1 protein.
Length = 354
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Frame = +1
Query: 190 RRKVTNLDKIR-------GFPRSYNVNEHLRSSVRATTRESKYPTGSPSCLWTTA 333
RR LD++R G + Y + HL + R + E YP P C W A
Sbjct: 241 RRDKATLDRLRVHKCFYQGCGKVYTKSSHLTAHERVHSGEKPYPCEWPGCSWRFA 295
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 415 TSPGLSTRPKDSSLPTDILKILT-TFKISSVTCKNGLYYGAGYELPADLKTQTAFSTKM 588
T G + DS TD+ + T TFK + CKNG+ YE + K F+ K+
Sbjct: 420 TIKGEGAQSADSVAQTDVGEPGTVTFKDLNFDCKNGVKLRWNYEPSVNSKKSPTFTVKV 478
>AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical
protein Y41D4B.16 protein.
Length = 453
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 298 PTGSPSCLWTTATLP--VTSETTASKLLPSARGRSLSGALQTSPGLSTRPKDSSLPTDIL 471
PT + + L +TA+ P ++ T+A+ P+ + + + T+P ++RP +S T
Sbjct: 365 PTTTSAALSSTASTPSIASTATSAATNPPTTTAGASTNSPATNPPTTSRPITASQSTTSQ 424
Query: 472 KILTTFKI 495
+ TT K+
Sbjct: 425 NVETTTKL 432
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 247 NEHLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLS 402
N S+ R +TR S T S T T+ + +T + + P +GRSLS
Sbjct: 2308 NRRPSSTPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLS 2358
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 247 NEHLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLS 402
N S+ R +TR S T S T T+ + +T + + P +GRSLS
Sbjct: 2308 NRRPSSTPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLS 2358
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 247 NEHLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLS 402
N S+ R +TR S T S T T+ + +T + + P +GRSLS
Sbjct: 2308 NRRPSSTPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLS 2358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,775,527
Number of Sequences: 27780
Number of extensions: 321008
Number of successful extensions: 1080
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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