BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00890
(724 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 111 8e-27
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 42 8e-06
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 42 8e-06
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 39 5e-05
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 39 5e-05
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 36 4e-04
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 36 5e-04
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 35 9e-04
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 2.9
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 3.9
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 3.9
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 22 6.7
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 22 6.7
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 8.9
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 8.9
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 111 bits (266), Expect = 8e-27
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 8/111 (7%)
Frame = +3
Query: 234 LEKKRGR---AIATGTVRLPNGQ----TRPLDIDTLGNMLESSALSPNRELYGSIHNNGH 392
LE+ R R AI TG+V G+ T ID LGN++E+S LSPN+ +YG +HN GH
Sbjct: 310 LERWRDRIYEAIHTGSVINTRGERIQLTEKNGIDVLGNIMEASILSPNQNVYGDLHNFGH 369
Query: 393 SFTAYMHDPEHRYLEQFGVIADEATTMRDPFFYRWHAYM-MTFSRSTRNLP 542
+Y+HDP+HRYLE FGV+ D AT MRDP FYRWHA++ F LP
Sbjct: 370 VAISYIHDPDHRYLESFGVMGDSATAMRDPIFYRWHAFVDDVFQEHKNTLP 420
Score = 107 bits (258), Expect = 8e-26
Identities = 45/67 (67%), Positives = 54/67 (80%)
Frame = +2
Query: 2 FYMHQQVIARFNCERLCNSLKRVKKFSNWREPIPEAYFPKLDSLTSSRGWPPRQSGMQWQ 181
+YMHQQ++AR+NCERLCN L RVK+F NW EPIPEAYFPKLDSL +SR WP R SG +
Sbjct: 235 YYMHQQIMARYNCERLCNRLGRVKRFINWHEPIPEAYFPKLDSLVASRTWPFRPSGTVLK 294
Query: 182 DLNRAAE 202
D+NR +
Sbjct: 295 DINRQVD 301
Score = 71.7 bits (168), Expect = 6e-15
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +2
Query: 509 DDVFQKHKESAYVRPYTRSELENQGVQVRSVSVETPGGQPNTLNTYWMLSDVNLSRGLDF 688
DDVFQ+HK + + YT +L+ G+++ + + T Q N LNT+W SDV+LSRGLDF
Sbjct: 409 DDVFQEHKNT--LPQYTVQQLDFPGIEIADIKLTT-NQQRNILNTFWTKSDVDLSRGLDF 465
Query: 689 SDNGPVYARFTH 724
+ G V ARFTH
Sbjct: 466 TPRGAVLARFTH 477
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 41.5 bits (93), Expect = 8e-06
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +3
Query: 309 IDTLGNMLESSALSPNRELYGSIHNNGHSFTAYMHDPEHRYLEQFGVIADEATTMRDPFF 488
++ LGN++E +A S N E YGSI Y + +Y + +T+M+DP F
Sbjct: 359 LNILGNIIEGNADSYNTEFYGSIDTLARKILGYNLEAASKYQIVPSALEIFSTSMKDPAF 418
Query: 489 YRWHAYMMTFSRS 527
YR + ++ + S
Sbjct: 419 YRIYKRIIDYYHS 431
Score = 35.1 bits (77), Expect = 7e-04
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 5 YMHQQVIARFNCERLCNSLKRVKKFSNWREPIPEAYFPKLDSLTSSRGWP 154
Y H+ ++ R+ ERL N L +++F +W++P Y+P ++T S G P
Sbjct: 261 YSHKLLLNRYYLERLSNDLPYLEEF-DWQKPFYPGYYP---TMTYSNGLP 306
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 41.5 bits (93), Expect = 8e-06
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +3
Query: 309 IDTLGNMLESSALSPNRELYGSIHNNGHSFTAYMHDPEHRYLEQFGVIADEATTMRDPFF 488
++ LGN++E +A S N E YGSI Y + +Y + +T+M+DP F
Sbjct: 359 LNILGNIIEGNADSYNTEFYGSIDTLARKILGYNLEAASKYQIVPSALEIFSTSMKDPAF 418
Query: 489 YRWHAYMMTFSRS 527
YR + ++ + S
Sbjct: 419 YRIYKRIIDYYHS 431
Score = 35.9 bits (79), Expect = 4e-04
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 5 YMHQQVIARFNCERLCNSLKRVKKFSNWREPIPEAYFPKLDSLTSSRGWP 154
Y H+ ++ R+ ERL N L +++F +W++P Y+P ++T S G P
Sbjct: 261 YSHKLLLNRYYLERLSNDLPHLEEF-DWQKPFYPGYYP---TMTYSNGLP 306
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 38.7 bits (86), Expect = 5e-05
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 2 FYMHQQVIARFNCERLCNSLKRVKKFSNWREPIPEAYFPKLDSLTSSRGWPPRQSG 169
F++H+QV+ R+ ERL N + V + + PIP Y+P + + +P R++G
Sbjct: 259 FFLHKQVLNRYYLERLSNDMGEV-SYVSLDHPIPTGYYPTM-RFRNGLAFPQRETG 312
Score = 31.1 bits (67), Expect = 0.011
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 309 IDTLGNMLESSALSPNRELYGSIHNNGHSFTAYMHDPEHRYLEQFGVIADEATTMRDPFF 488
++ LGN+++ + S N +LYG + + ++ +Y + +T++RDP F
Sbjct: 358 LNVLGNIVQGNGDSVNVQLYGQLDLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRDPVF 417
Query: 489 YRWHAYMMT-FSRSTRNLP 542
+ + ++ + + NLP
Sbjct: 418 FSIYKTILDYYHKYKENLP 436
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 38.7 bits (86), Expect = 5e-05
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 2 FYMHQQVIARFNCERLCNSLKRVKKFSNWREPIPEAYFPKLDSLTSSRGWPPRQSG 169
F++H+QV+ R+ ERL N + V + + PIP Y+P + + +P R++G
Sbjct: 259 FFLHKQVLNRYYLERLSNDMGEV-SYVSLDHPIPTGYYPTM-RFRNGLAFPQRETG 312
Score = 31.1 bits (67), Expect = 0.011
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 309 IDTLGNMLESSALSPNRELYGSIHNNGHSFTAYMHDPEHRYLEQFGVIADEATTMRDPFF 488
++ LGN+++ + S N +LYG + + ++ +Y + +T++RDP F
Sbjct: 358 LNVLGNIVQGNGDSVNVQLYGQLDLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRDPVF 417
Query: 489 YRWHAYMMT-FSRSTRNLP 542
+ + ++ + + NLP
Sbjct: 418 FSIYKTILDYYHKYKENLP 436
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 35.9 bits (79), Expect = 4e-04
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +3
Query: 300 PLDIDTLGNMLESSALSPNRELYGSIHNNGHSFTAYMHDPEHRYLEQFGVIADEATTMRD 479
P ++ LGN++E S+ S N + YG Y D +++ + +T+MRD
Sbjct: 358 PEGLNMLGNVIEGSSDSINTKFYGMYDILARDILGYNFDFQNKNNLIPSALQSYSTSMRD 417
Query: 480 PFFYRWHAYMMTF 518
P FY + ++++
Sbjct: 418 PAFYMLYQNILSY 430
Score = 33.1 bits (72), Expect = 0.003
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = +2
Query: 2 FYMHQQVIARFNCERLCNSLKRVKKFSNWREPIPEAYF 115
+++H+Q++ R+ ER+ N L + +F +W +PI ++
Sbjct: 262 YFLHKQLMTRYFLERMSNDLGKTAEF-DWNKPINSGFY 298
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 35.5 bits (78), Expect = 5e-04
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +3
Query: 231 TLEKKRGRAIATGTVRLPNG----QTRPLDIDTLGNMLESSALSPNRELYGSIHNNGHSF 398
TLEK+ AI +G V P G +P ++ LG+++E + S N YGS+
Sbjct: 345 TLEKRLRDAIDSGNVITPQGVFLSLYQPQGMNILGDLIEGTGRSVNPRYYGSLQAAARKL 404
Query: 399 TAYMHDPEHRYLEQFGVIADEATTMRDPFFYRWHAYMMT-FSRSTRNLP 542
+ E+ + + + DP FY+ + +M + + ++LP
Sbjct: 405 LGNAPEVENIWDYTPSSLELGEVAVHDPVFYQLYKKVMNLYQQYQQSLP 453
Score = 31.5 bits (68), Expect = 0.008
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +2
Query: 5 YMHQQVIARFNCERLCNSLKRVKKFSNWREPIPEAYFPKLDSLTSSRGWPPRQSGMQWQD 184
Y+HQQ++AR+ RL N L +K E + Y P L L + R +Q Q
Sbjct: 278 YLHQQLLARYELNRLSNGLGPIKDID--YENVQSLYQPHLRGLNGLE-FAGRPQNLQLQS 334
Query: 185 LNRAAEVYL*PLTK 226
Y+ L K
Sbjct: 335 QRNQLIQYVATLEK 348
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 34.7 bits (76), Expect = 9e-04
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +3
Query: 300 PLDIDTLGNMLESSALSPNRELYGSIHNNGHSFTAYMHDPEHRYLEQFGVIADEATTMRD 479
P ++ LGN++E ++ S N + YG Y D +++ + +T+MRD
Sbjct: 358 PEGLNMLGNVIEGNSDSINTKFYGMYDILARDILGYNFDFQNKNNLIPSALQSYSTSMRD 417
Query: 480 PFFYRWHAYMMTF 518
P FY + ++++
Sbjct: 418 PAFYMLYQKILSY 430
Score = 33.1 bits (72), Expect = 0.003
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = +2
Query: 2 FYMHQQVIARFNCERLCNSLKRVKKFSNWREPIPEAYF 115
+++H+Q++ R+ ER+ N L + +F +W +PI ++
Sbjct: 262 YFLHKQLMTRYFLERMSNDLGKTAEF-DWNKPINSGFY 298
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 211 VTIDEMERWRRNVEELSRLVPLD 279
+T +E WR N + L+P+D
Sbjct: 8 ITTTGLENWRVNNSNYTELLPID 30
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = -3
Query: 452 DNTKLFKVSVFRVVHVRGETVPVVVYRTIQFSVRREGAGLQHVAERIDVK 303
++TK+F +F +V ++ Y + S+R L+ A++++VK
Sbjct: 215 EDTKVFVTCIFIWAYVIPLIFIILFYSRLLSSIRNHEKMLREQAKKMNVK 264
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = -3
Query: 452 DNTKLFKVSVFRVVHVRGETVPVVVYRTIQFSVRREGAGLQHVAERIDVK 303
++TK+F +F +V ++ Y + S+R L+ A++++VK
Sbjct: 215 EDTKVFVTCIFIWAYVIPLIFIILFYSRLLSSIRNHEKMLREQAKKMNVK 264
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/22 (31%), Positives = 17/22 (77%)
Frame = -3
Query: 575 SRAQIWYKDARRQIPCASGKRH 510
++ +IW+++ R +I ASG+++
Sbjct: 62 AQIKIWFQNKRAKIKKASGQKN 83
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/22 (31%), Positives = 17/22 (77%)
Frame = -3
Query: 575 SRAQIWYKDARRQIPCASGKRH 510
++ +IW+++ R +I ASG+++
Sbjct: 62 AQIKIWFQNKRAKIKKASGQKN 83
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 689 SDNGPVYARFT 721
SDNG YA+FT
Sbjct: 173 SDNGESYAKFT 183
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 391 TVSPRTCTTRNTD 429
T SP TC T+N D
Sbjct: 19 TNSPHTCRTKNGD 31
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,418
Number of Sequences: 438
Number of extensions: 5172
Number of successful extensions: 32
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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