Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00889
(769 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 3.1
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 23 3.1
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 22 5.5
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 22 5.5
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 22 5.5
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 22 5.5
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 22 5.5
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 5.5
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 7.2
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 7.2
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 7.2
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 9.5
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 3.1
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 683 IGMVRVSLWFWAW 645
+ ++ +SLWF AW
Sbjct: 279 VALMTISLWFMAW 291
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 23.0 bits (47), Expect = 3.1
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 683 IGMVRVSLWFWAW 645
+ ++ +SLWF AW
Sbjct: 29 VALMTISLWFMAW 41
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -2
Query: 291 HG--NAGRRCRIVCISKDKFDPCLEGGFD 211
HG N R+ C DKF CL+ D
Sbjct: 76 HGLTNTASHTRLSCDCDDKFYDCLKNSAD 104
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -2
Query: 291 HG--NAGRRCRIVCISKDKFDPCLEGGFD 211
HG N R+ C DKF CL+ D
Sbjct: 81 HGLTNTASHTRLSCDCDDKFYDCLKNSAD 109
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 641 GRCGLRASPACRTPTRPT 588
G+C + A A PTRPT
Sbjct: 152 GKCLIEALDAILPPTRPT 169
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 641 GRCGLRASPACRTPTRPT 588
G+C + A A PTRPT
Sbjct: 168 GKCLIEALDAILPPTRPT 185
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -2
Query: 291 HG--NAGRRCRIVCISKDKFDPCLEGGFD 211
HG N R+ C DKF CL+ D
Sbjct: 81 HGLTNTASHTRLSCDCDDKFYDCLKNSAD 109
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 641 GRCGLRASPACRTPTRPT 588
G+C + A A PTRPT
Sbjct: 225 GKCLIEALDAILPPTRPT 242
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 599 TRPTVAQ*TRHRGLLSRPHRRRAARWGPLSIRVLLVC 489
T TV Q R +S RRAAR + + V +VC
Sbjct: 303 TTTTVYQFIEERQRISLSKERRAARTLGVIMGVFVVC 339
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 599 TRPTVAQ*TRHRGLLSRPHRRRAARWGPLSIRVLLVC 489
T TV Q R +S RRAAR + + V +VC
Sbjct: 303 TTTTVYQFIEERQRISLSKERRAARTLGVIMGVFVVC 339
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 599 TRPTVAQ*TRHRGLLSRPHRRRAARWGPLSIRVLLVC 489
T TV Q R +S RRAAR + + V +VC
Sbjct: 303 TTTTVYQFIEERQRISLSKERRAARTLGVIMGVFVVC 339
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 72 VQEHQTRSVITKRRADLEQDTGSP 143
VQ+HQ +V + +D++ GSP
Sbjct: 255 VQQHQPVTVNRQLNSDVQPGHGSP 278
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,361
Number of Sequences: 438
Number of extensions: 4545
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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