Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00888
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr... 95 4e-20
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 29 3.9
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 29 3.9
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 29 3.9
AL132847-3|CAE18001.1| 91|Caenorhabditis elegans Hypothetical ... 29 3.9
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 29 3.9
Z68302-7|CAH60770.1| 495|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z68302-6|CAA92635.2| 510|Caenorhabditis elegans Hypothetical pr... 27 9.0
>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical protein
F46H5.4 protein.
Length = 2018
Score = 95.1 bits (226), Expect = 4e-20
Identities = 39/83 (46%), Positives = 59/83 (71%)
Frame = +3
Query: 6 LDPDKAYIQITYVEPYFEPHELRRRLTHYERNHNIKRFMYATPFTAEGRAHGDIVDQCKR 185
L+P+KAYIQIT+V+ Y +E R T++ R +N+ RF + P+T EGRA G++ Q K+
Sbjct: 1794 LNPEKAYIQITFVDVYLSDNEKMERTTYFTRRNNVNRFYFEAPYTMEGRAQGELAAQYKK 1853
Query: 186 KTILTTAHHFPYVKTRIQXVQKT 254
+TILT + FPY+KTR+Q V ++
Sbjct: 1854 RTILTVENSFPYIKTRLQVVNRS 1876
Score = 85.8 bits (203), Expect = 2e-17
Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Frame = +2
Query: 266 SPIEVAIEDIQKKVAELSAATSAEPADAKMLQMVLQGCVTTTVNQGPLELAQVFL--APV 439
SPIEVAIEDI+KK ELSAA A+ + KML M +QG + TTVNQGPLE+A VFL A +
Sbjct: 1881 SPIEVAIEDIEKKTRELSAA--AQHKNPKMLSMFIQGSIGTTVNQGPLEIANVFLANAML 1938
Query: 440 ADGTQPPTRLTNKLRLTFK 496
D +P RL NKLRL+F+
Sbjct: 1939 DDRGRPVDRLQNKLRLSFR 1957
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 508 ECQDALKKNKNLIGLDQREYQRELQRNLQHLAASLQPLL 624
+ +A++ + LIG DQ+EYQR ++ N + L+P+L
Sbjct: 1962 KAMEAIELCRQLIGEDQKEYQRNVEENFESFVTHLKPML 2000
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Frame = +2
Query: 266 SPIEVAIEDIQKKVAE----LSAATSAEPADAKMLQMVLQGCVTTTVNQGPLELAQVF 427
SP+E A + + K + L+AA++ D K LQ++LQG V TVN GPL A+VF
Sbjct: 2241 SPLEFACQKLNTKAEQIRKTLNAASNGRQLDVKGLQLLLQGAVLPTVNAGPLAYAEVF 2298
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 6 LDPDKAYIQITYVEP 50
+DP AY+QIT+VEP
Sbjct: 2138 IDPTVAYVQITHVEP 2152
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Frame = +2
Query: 266 SPIEVAIEDIQKKVAE----LSAATSAEPADAKMLQMVLQGCVTTTVNQGPLELAQVF 427
SP+E A + + K + L+AA++ D K LQ++LQG V TVN GPL A+VF
Sbjct: 2241 SPLEFACQKLNTKAEQIRKTLNAASNGRQLDVKGLQLLLQGAVLPTVNAGPLAYAEVF 2298
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 6 LDPDKAYIQITYVEP 50
+DP AY+QIT+VEP
Sbjct: 2138 IDPTVAYVQITHVEP 2152
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 553 DQREYQRELQRNLQHLAASLQPLLQHPPSHAALLSN 660
+QRE QRE +R QH + Q L Q HAA +N
Sbjct: 402 EQRE-QRERERERQHQQQAQQALHQQQQQHAAAAAN 436
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defective
protein 27,isoform b protein.
Length = 1124
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 553 DQREYQRELQRNLQHLAASLQPLLQHPPSHAALLSN 660
+QRE QRE +R QH + Q L Q HAA +N
Sbjct: 914 EQRE-QRERERERQHQQQAQQALHQQQQQHAAAAAN 948
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defective
protein 27,isoform a protein.
Length = 1129
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 553 DQREYQRELQRNLQHLAASLQPLLQHPPSHAALLSN 660
+QRE QRE +R QH + Q L Q HAA +N
Sbjct: 919 EQRE-QRERERERQHQQQAQQALHQQQQQHAAAAAN 953
>AL132847-3|CAE18001.1| 91|Caenorhabditis elegans Hypothetical
protein Y48G10A.6 protein.
Length = 91
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 416 AQVFLAPVADGTQPP 460
A VF APVADGT+PP
Sbjct: 13 AIVFSAPVADGTEPP 27
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 553 DQREYQRELQRNLQHLAASLQPLLQHPPSHAALLSN 660
+QRE QRE +R QH + Q L Q HAA +N
Sbjct: 919 EQRE-QRERERERQHQQQAQQALHQQQQQHAAAAAN 953
>Z68302-7|CAH60770.1| 495|Caenorhabditis elegans Hypothetical
protein ZK792.4b protein.
Length = 495
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 284 IEDIQKKVAELSAATSAEPADAKMLQMVLQGCVTTTVN 397
+ DIQ E +A SA D + L+++L G + +T+N
Sbjct: 77 LRDIQSTNGETAAHISAAHGDMRALEILLGGSLKSTMN 114
>Z68302-6|CAA92635.2| 510|Caenorhabditis elegans Hypothetical
protein ZK792.4a protein.
Length = 510
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 284 IEDIQKKVAELSAATSAEPADAKMLQMVLQGCVTTTVN 397
+ DIQ E +A SA D + L+++L G + +T+N
Sbjct: 92 LRDIQSTNGETAAHISAAHGDMRALEILLGGSLKSTMN 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.128 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,086,048
Number of Sequences: 27780
Number of extensions: 159568
Number of successful extensions: 395
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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