Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00887
(768 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 134 1e-31
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 126 3e-29
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 121 6e-28
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 85 4e-17
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 84 1e-16
09_01_0039 - 687711-688607,692336-693113,693414-693501,693761-69... 30 2.3
01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313 29 4.1
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 5.4
07_03_0105 + 13455906-13457198 29 5.4
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440... 29 5.4
04_01_0418 - 5531652-5531827,5535111-5535195,5535250-5535402,553... 29 5.4
01_07_0346 + 42889121-42890406,42896115-42896118 29 5.4
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 28 7.1
09_06_0175 + 21350528-21351136 28 7.1
05_06_0149 - 25991761-25993181,25993246-25993324 28 7.1
07_01_0387 + 2902957-2904705 28 9.4
04_04_1664 + 35162432-35162814,35162912-35163140 28 9.4
04_04_0930 - 29480700-29480853,29481007-29483036 28 9.4
03_06_0048 - 31274899-31277193 28 9.4
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 28 9.4
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 134 bits (323), Expect = 1e-31
Identities = 59/108 (54%), Positives = 80/108 (74%)
Frame = +3
Query: 192 TAGVQIWRIQNFEPIPVASEGIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDE 371
T G++IWRI+NF+P+P+ + GKF+ GDSYIIL+TT+ +L DIHYWIG++++QDE
Sbjct: 49 TGGLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDE 108
Query: 372 SGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGI 515
SG AAILTV LD GG AVQ+RE G+E+ FLSYF+ + GG+
Sbjct: 109 SGTAAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGV 156
Score = 45.2 bits (102), Expect = 6e-05
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Frame = +3
Query: 156 AKVHPAFANVGRTAGVQIWRIQNFEPIPVASEGIGKFYKGDSYII--LRTTSDSRNNLSW 329
AK P A + T +Q+WRI + + I + S KFY GD YI + D L
Sbjct: 391 AKEEPQ-AYIDCTGSLQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECL-- 447
Query: 330 DIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEG 509
I W G++S +++ A L + + AVQ R G E F FQ+ +G
Sbjct: 448 -IGSWFGKKSIEEDRVTAISLASKMVESAKFQAVQTRLYEGKEPIQFFVIFQS-FQVFKG 505
Query: 510 GI 515
G+
Sbjct: 506 GL 507
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 620 ASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGR 763
+S+N D F+L + I+ F G + E+ KA+ ++D H G+
Sbjct: 170 SSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTFHEGK 217
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 126 bits (303), Expect = 3e-29
Identities = 54/107 (50%), Positives = 77/107 (71%)
Frame = +3
Query: 195 AGVQIWRIQNFEPIPVASEGIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDES 374
+G+++WRI+NF+P+PV + GKFY GDSYIIL+TT+ + D+HYW+G++++QDE+
Sbjct: 37 SGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEA 96
Query: 375 GAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGI 515
G AAILTV LD GG AVQ+RE G E+ LSYF+ + GG+
Sbjct: 97 GTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGV 143
Score = 55.6 bits (128), Expect = 4e-08
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = +2
Query: 404 GRQVRGRRGPAPRDHGSRKCFVPIIFPDTLDLFGGGNPSGFNHVVTNAGAQ-KRMFQVKG 580
GR V+ R F P I P GG SGFNHV N R++ +G
Sbjct: 112 GRAVQYREVQGGETEKLLSYFRPCIMPQP-----GGVASGFNHVEVNQQDHVTRLYVCQG 166
Query: 581 KRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHG 760
K V V++V +S+N D F+L N I+ F G + E+ KA+ ++D H G
Sbjct: 167 KHVVHVKEVPFVRSSLNHEDIFILDTANKIFQFNGSNSCIQERAKALEVVQYIKDTFHEG 226
Query: 761 R 763
+
Sbjct: 227 K 227
Score = 41.9 bits (94), Expect = 5e-04
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +3
Query: 192 TAGVQIWRIQNFEPIPVASEGIGKFYKGDSYIILRT-TSDSRNNLSWDIHYWIGRESTQD 368
T +Q+WR+ ++S K Y GD YI T T D + I W G++S ++
Sbjct: 406 TGHLQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECL--IGTWFGKKSVEE 463
Query: 369 ESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGI 515
+ +A L + A Q R G E F FQ+ L +GG+
Sbjct: 464 DRTSAISLASKMFQAAKFQAAQARLYEGKEPIQFFVIFQS-LQVFKGGL 511
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Frame = +2
Query: 473 IIFPDTLDLFGGGNPSGFNHVVTNAGAQK--------RMFQVKGK--RDVRVRQVDPQIA 622
+IF +L +F GG SG+ + + G +F+++G +++ QVD +
Sbjct: 499 VIF-QSLQVFKGGLSSGYKNFIAVNGTDDDTYVEGGLALFRIQGSGSENMQAIQVDAVSS 557
Query: 623 SMNKGDCFVLSLDNDIYVFVGEKAKNVE 706
S+N C++L N ++ + G +++
Sbjct: 558 SLNSSYCYILHNGNTVFTWTGNLTTSLD 585
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 121 bits (292), Expect = 6e-28
Identities = 53/107 (49%), Positives = 76/107 (71%)
Frame = +3
Query: 195 AGVQIWRIQNFEPIPVASEGIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDES 374
+G++IWRI+ + +PV E G+F+ GDSY+IL+TT+ + DIHYW+G++++QDE+
Sbjct: 76 SGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEA 135
Query: 375 GAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGI 515
G AAI TV LD GG AVQ+RE G+E+ FLSYF+ + EGGI
Sbjct: 136 GTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGI 182
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = +2
Query: 404 GRQVRGRRGPAPRDHGSRKCFVPIIFPDTLDLFGGGNPSGFNHVVTNAGAQ-KRMFQVKG 580
GR V+ R F P I P+ GG SGF H N R+F +G
Sbjct: 151 GRAVQYREVQGNETERFLSYFKPCIIPEE-----GGIASGFRHTEINEREHVTRLFVCRG 205
Query: 581 KRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHG 760
K V V++V +S+N D F+L + I+ F G + E+ KA+ ++D +H G
Sbjct: 206 KHTVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYLKDSNHEG 265
Query: 761 R 763
+
Sbjct: 266 K 266
Score = 49.2 bits (112), Expect = 4e-06
Identities = 45/167 (26%), Positives = 67/167 (40%), Gaps = 9/167 (5%)
Frame = +3
Query: 42 FSCLLFVFLGSVWARTATK--PQEISGPITSLSDK---NARDKAKVHPAFAN----VGRT 194
F ++F S W + A E G + +L + N + AK P + T
Sbjct: 391 FETVIFRSKFSKWPKKADAVVSDESRGKVAALLKRQGFNVKGLAKAAPVKEEPQPQIDCT 450
Query: 195 AGVQIWRIQNFEPIPVASEGIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDES 374
+Q+WR+ E ++ KFY GD YI + + I W G++S QDE
Sbjct: 451 GNLQVWRVNGTEKTFLSFSEQCKFYSGDCYIF-QYSYPGEEGEECLIGTWFGKKSVQDEK 509
Query: 375 GAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGI 515
A + + + AV R G E A F S FQ L +GG+
Sbjct: 510 TTAISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQN-LVIFKGGV 555
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Frame = +2
Query: 491 LDLFGGGNPSGFNHVVTNAGAQK--------RMFQVKGK--RDVRVRQVDPQIASMNKGD 640
L +F GG +G+ V+ G + +F+V+G +++ QVD S+N
Sbjct: 548 LVIFKGGVSTGYKKFVSENGIEDDTYSENGVALFRVQGSGPENMQAIQVDTAATSLNSSY 607
Query: 641 CFVLSLDNDIYVFVGEKAKNVEK 709
C+VL + ++ ++G + ++++
Sbjct: 608 CYVLHDGDTLFTWIGNLSSSMDQ 630
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 85.4 bits (202), Expect = 4e-17
Identities = 43/118 (36%), Positives = 62/118 (52%)
Frame = +3
Query: 162 VHPAFANVGRTAGVQIWRIQNFEPIPVASEGIGKFYKGDSYIILRTTSDSRNNLSWDIHY 341
V AF VG G+ IW I I + GKFY G++YIIL T ++HY
Sbjct: 4 VDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHNVHY 63
Query: 342 WIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGI 515
W+G E+ +++ A+ + LD G VQ+RET G ES FLSYF+ + ++G +
Sbjct: 64 WVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQGSL 121
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/104 (26%), Positives = 46/104 (44%)
Frame = +3
Query: 201 VQIWRIQNFEPIPVASEGIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGA 380
+++W + N + +E + Y GD YII + + + W G S ++ A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHL-FFAWSGLNSINEDRVA 460
Query: 381 AAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGG 512
AA L G+ D G AV + G E +F F++ L +GG
Sbjct: 461 AASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFKS-LIIFKGG 503
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 84.2 bits (199), Expect = 1e-16
Identities = 41/75 (54%), Positives = 50/75 (66%)
Frame = +3
Query: 288 ILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESAL 467
I T S +DIH+WIG++S+QDE+G AAI TV LD GG AVQHRE G+ES
Sbjct: 54 ITTTCSKGGGAYLFDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDK 113
Query: 468 FLSYFQTPLTYLEGG 512
FLSYF+ + LEGG
Sbjct: 114 FLSYFKPCIIPLEGG 128
Score = 55.2 bits (127), Expect = 5e-08
Identities = 35/132 (26%), Positives = 59/132 (44%)
Frame = +3
Query: 120 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVASEGIGKFYKGDSYIILRT 299
I S +A +V P G+ ++++ + + E +GKFY GD YI+L T
Sbjct: 376 IKGASKSSAPVDEEVPPLLEGDGK---LEVYCVNGSAKTALPKEELGKFYSGDCYIVLYT 432
Query: 300 TSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSY 479
+ + YWIG++S ++ A + + G + R G E F++
Sbjct: 433 YHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIYQGKEPPQFIAL 492
Query: 480 FQTPLTYLEGGI 515
FQ P+ L+GGI
Sbjct: 493 FQ-PMVILKGGI 503
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/119 (29%), Positives = 54/119 (45%)
Frame = +2
Query: 404 GRQVRGRRGPAPRDHGSRKCFVPIIFPDTLDLFGGGNPSGFNHVVTNAGAQKRMFQVKGK 583
GR V+ R F P I P GG SGF + + R++ KGK
Sbjct: 98 GRAVQHRELQGYESDKFLSYFKPCIIP-----LEGGFASGFKTPEEDK-FETRLYICKGK 151
Query: 584 RDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHG 760
R +RV++V +S+N D F+L + IY F G + E+ KA+ +++ H+G
Sbjct: 152 RAIRVKEVPFARSSLNHDDVFILDTEKKIYQFNGANSNIQERAKALEAIQHLKETYHNG 210
>09_01_0039 -
687711-688607,692336-693113,693414-693501,693761-694148,
694176-694401,694527-694680,695073-695145
Length = 867
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +2
Query: 503 GGGNPSGFNHVVTNAGA-----QKRMFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDND 667
GGGN + + T + K ++ G+ RVR+VD + N+ DCF + +D
Sbjct: 6 GGGNKGVVSEMTTRSKPLSVLMTKARGELYGRSFGRVREVDVEADGCNRHDCFRILVDLP 65
Query: 668 IYVFVGEK-AKNVEKLKAISFANQVR 742
+ + K + V K+KA N R
Sbjct: 66 VAKPLKSKIGQKVNKVKATYQPNASR 91
>01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313
Length = 289
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 334 STTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSSTER-PWVTK 459
ST + SRR+ + P SS +AWT A R W+TK
Sbjct: 67 STYLASSSRRRRKRPPVTSSDVAWTVEDAAIGDELRRGTWMTK 109
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 431 PAPRDHGSRKCFVPIIFPDTLDLFGGGNPSGFNHV 535
P P H + V FPD L L GG + GF+ +
Sbjct: 48 PPPPHHRRARSEVAFRFPDDLGLGGGADGGGFDEI 82
>07_03_0105 + 13455906-13457198
Length = 430
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 445 VSRCWTAAPPNLSSRPTVRIAAA 377
V R W +A P+L+SRP +AAA
Sbjct: 37 VCRAWRSALPSLASRPLAPVAAA 59
>06_01_0609 +
4404287-4405023,4405496-4405631,4405724-4405876,
4405985-4406128,4406224-4406375,4406453-4406552,
4406653-4406775,4406876-4407037,4407190-4407247,
4407324-4407502,4408294-4408402,4408567-4408637,
4408891-4408986,4409727-4409803,4410983-4411066,
4411473-4411607,4411744-4411819,4413072-4413167,
4413580-4413671,4413745-4413868,4413966-4414052
Length = 996
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +1
Query: 337 TTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSSTERPWVTKVLCSYHISRHP*PIWRGES 516
+T S + R+ + PP ++P++ T S RSS TKV + P P + +
Sbjct: 33 STPSKPTPRRKPKAPPVAAPMSPVTPSSVRRSSRLLETPTKVTSETPVKPTPTPKRKRAA 92
Query: 517 VRF*PRRHERGSPETNVPGQREARCPR 597
P+ + P+ QR+ + P+
Sbjct: 93 PSPSPKTPTQSEPKRQRQRQRQRQQPK 119
>04_01_0418 -
5531652-5531827,5535111-5535195,5535250-5535402,
5535516-5535632,5536136-5536363
Length = 252
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 569 QVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVR 742
+VKG++D R QI + GDC+++S + + E +N L +S N+++
Sbjct: 125 KVKGEKDEVYRGASTQILGVAVGDCYIMSTSGNDAGMLLEGVRNNNGL--VSLNNELK 180
>01_07_0346 + 42889121-42890406,42896115-42896118
Length = 429
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 304 RTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAP 426
R+ T G +TTGSV SRR+ + + A T SS P
Sbjct: 125 RSATTKTSGAATTGSVSSRRRARRAAAVARHSAATPSSAPP 165
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 283 TSFYGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 438
TS G PR AT +T GS R+T P QS+P T+ +PR++T
Sbjct: 104 TSVQGAPRAPATA----ATVPQGGSPRRTV--PAQSAPGGPATAQSSPRAAT 149
>09_06_0175 + 21350528-21351136
Length = 202
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +2
Query: 347 RSGVDARRVRSRRNPHRWPGRQVRGRRGPAPRDHGSRKCF 466
R G ARRVRS R P R P RR PRD F
Sbjct: 80 RGGGGARRVRSPRTPSRPPNSTSARRR--RPRDAAGTSLF 117
>05_06_0149 - 25991761-25993181,25993246-25993324
Length = 499
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -3
Query: 469 NKALS*PMVSRCWTAAPPNLSSRPTVRIAAAPDSSCVDSRPIQ*WISHDRLLRLSEVVRK 290
N A+S ++R AA P++ T R+ APDS V + PI+ SHD L + V+R+
Sbjct: 71 NDAVSADAMARL-AAANPSI----TFRLLPAPDSPDVGAHPIK--RSHDTLKLANPVLRE 123
Query: 289 MMYESP 272
+ P
Sbjct: 124 FLRSLP 129
>07_01_0387 + 2902957-2904705
Length = 582
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 145 PVTKPKSIRLLPMSAEQPVCKYGEYRTSNQYPLH 246
PV + +R LP+S P C G Y + PLH
Sbjct: 102 PVGERPPVRGLPVSGRLPACLDGVYVRNGANPLH 135
>04_04_1664 + 35162432-35162814,35162912-35163140
Length = 203
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 273 LCRIFLFLLMQRVLVRSSVFSIFAHRLFCRHWQKPDGLW-LCHGRFY 136
L R+FL + ++ S+V RL CRH P GL L H FY
Sbjct: 68 LWRLFLAFFLFLAILLSAVAQSPPSRLQCRHLWAPAGLLSLAHLAFY 114
>04_04_0930 - 29480700-29480853,29481007-29483036
Length = 727
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +2
Query: 653 SLDNDIY---VFVGEKAKNVEKLKAISFANQVRDQDHHGR 763
SLD D+Y VFV E ++++ N+ ++ DH GR
Sbjct: 520 SLDTDVYAFGVFVMEVLTGRSPSSSVTYHNRQQEHDHDGR 559
>03_06_0048 - 31274899-31277193
Length = 764
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 452 THGLSVLDRGAPELVVQANGEDCGGS*LVL-RRLPTDPV 339
T G LDR P VV NG++ G L ++LPT PV
Sbjct: 335 TVGAGTLDRDFPAHVVLGNGKNYSGVSLYSGKQLPTTPV 373
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +1
Query: 262 NSTKEIHTSFYGRPRTVATIYHGIST-TGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 438
NST++ YG G T T + GS S +PP S+ ++ AP+S
Sbjct: 548 NSTQDGSAPSYGAQGVAGQASPGQQTSTPAAGSHPGYSSQPPTSAASSYPVQGSAPQSGY 607
Query: 439 ERP 447
P
Sbjct: 608 GAP 610
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,489,460
Number of Sequences: 37544
Number of extensions: 582539
Number of successful extensions: 2074
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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