Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00887
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 111 4e-25
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 81 6e-16
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 81 6e-16
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 34 0.097
Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical pr... 31 0.68
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 31 0.68
Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical ... 31 1.2
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 31 1.2
AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical ... 28 6.4
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 28 8.4
U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon ge... 28 8.4
AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein. 28 8.4
AF038611-7|AAB92040.1| 466|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 111 bits (268), Expect = 4e-25
Identities = 53/117 (45%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Frame = +3
Query: 168 PAFANVGRTAGVQIWRIQNF--EPIPVASEGIGKFYKGDSYIILRTTSDSRNNLSWDIHY 341
PA A +G+ G+ +WRI F EP+P G+ FY GD+YI L D WD+H+
Sbjct: 8 PALAEIGKKNGLLVWRINKFVLEPVPEVDHGV--FYIGDAYIALYQKYDG----CWDVHF 61
Query: 342 WIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGG 512
W+G+ ++ DE G AAI TV +DD GG QHRE +ES LFLSYF + Y+ GG
Sbjct: 62 WLGKNASTDEIGVAAIKTVEIDDSLGGIPTQHREIQNYESPLFLSYFPDGIRYVSGG 118
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +2
Query: 479 FPDTLDLFGGGNPSGFNHVVTNAGAQK-RMFQVKGKRDVRVRQVDPQIASMNKGDCFVLS 655
FPD + GG SG+ HV K +F KGKR+VR +V+ ++ S+N GD F+L
Sbjct: 108 FPDGIRYVSGGYESGYRHVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILD 167
Query: 656 LDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHG 760
L D+YV++ ++ +E++K ++ A + D + G
Sbjct: 168 LGKDLYVWMPPESGRLERIKGMARAKNIADHERMG 202
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 81.4 bits (192), Expect = 6e-16
Identities = 37/111 (33%), Positives = 60/111 (54%)
Frame = +3
Query: 180 NVGRTAGVQIWRIQNFEPIPVASEGIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRES 359
+VG G+ +W I+NF P + G+FY D+Y++L+TT ++ L I YW+G +
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 360 TQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGG 512
+ D+ +A+ VGL + RE M E+ FL+ F + Y+EGG
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGG 613
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 81.4 bits (192), Expect = 6e-16
Identities = 37/111 (33%), Positives = 60/111 (54%)
Frame = +3
Query: 180 NVGRTAGVQIWRIQNFEPIPVASEGIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRES 359
+VG G+ +W I+NF P + G+FY D+Y++L+TT ++ L I YW+G +
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 360 TQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGG 512
+ D+ +A+ VGL + RE M E+ FL+ F + Y+EGG
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGG 613
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 34.3 bits (75), Expect = 0.097
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 563 MFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKA 718
+ QV+G ++V VR V P ++S+++ CFV+ + + G + +EK KA
Sbjct: 221 LIQVRGSKNVDVRLVAPAMSSVHEVACFVVVHQKHLMKYEGLYSNILEKTKA 272
>Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical
protein ZK849.2c protein.
Length = 390
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 435 HRETMGHESALFLSYFQTPLTYLEGGIRPVLTTSSRTREPRNECSRSKGSEMSALDKSI 611
H +T HES + +T LT + L+T R EC RSK + + AL+ +
Sbjct: 117 HSKTAPHESDMIKKKLETQLTQFRSELTQGLSTVCELEIARKECDRSKRT-IQALETEV 174
>Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical
protein ZK849.2b protein.
Length = 412
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 435 HRETMGHESALFLSYFQTPLTYLEGGIRPVLTTSSRTREPRNECSRSKGSEMSALDKSI 611
H +T HES + +T LT + L+T R EC RSK + + AL+ +
Sbjct: 139 HSKTAPHESDMIKKKLETQLTQFRSELTQGLSTVCELEIARKECDRSKRT-IQALETEV 196
>Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical
protein ZK849.2a protein.
Length = 414
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 435 HRETMGHESALFLSYFQTPLTYLEGGIRPVLTTSSRTREPRNECSRSKGSEMSALDKSI 611
H +T HES + +T LT + L+T R EC RSK + + AL+ +
Sbjct: 141 HSKTAPHESDMIKKKLETQLTQFRSELTQGLSTVCELEIARKECDRSKRT-IQALETEV 198
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 31.5 bits (68), Expect = 0.68
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 262 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 423
+ST + T+ P T +T STT + + TS EPP SS P+ TT++
Sbjct: 91 SSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 150
Query: 424 PRSSTERP 447
+STE P
Sbjct: 151 ETTSTEAP 158
Score = 31.5 bits (68), Expect = 0.68
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 262 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 423
+ST + T+ P T +T STT + + TS EPP SS P+ TT++
Sbjct: 137 SSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 196
Query: 424 PRSSTERP 447
+STE P
Sbjct: 197 ETTSTEPP 204
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +1
Query: 262 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 423
+ST + T+ P T +T S T + + TS EPP SS P+ TT++
Sbjct: 804 SSTSPVQTTTITAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 863
Query: 424 PRSSTERP 447
+STE P
Sbjct: 864 ETTSTEPP 871
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +1
Query: 262 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 423
+ST + T+ P T +T S T + + TS EPP SS P+ TT++
Sbjct: 666 SSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 725
Query: 424 PRSSTERP 447
+STE P
Sbjct: 726 ETTSTEPP 733
>Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical
protein W04G3.2 protein.
Length = 565
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 239 GYWFEVLYSPYLHTG-CSADIGKSRMDFGFVTGVFI 135
G W++V+YSP + TG CS K D G TG +
Sbjct: 402 GQWYQVIYSPPVSTGPCSMVSYKKLSDNGEATGSIV 437
>AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical
protein Y62F5A.1b protein.
Length = 297
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 292 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSS 435
Y R T A I I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 292 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSS 435
Y R T A I I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical
protein T12F5.1 protein.
Length = 249
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +3
Query: 87 TATKPQEISGPITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPI 236
T K QE+ GP+ D+ D AK ++ R G QNF+ I
Sbjct: 171 TPEKGQEVEGPVEEFDDETNEDVAKAR-SYNPAARKLGGSSKSDQNFQKI 219
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 95 GRRPCPDGSQENKKETRKNDLHP 27
GRR CPDGS E+K+ + P
Sbjct: 161 GRRNCPDGSDEHKEHGKCKQHQP 183
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 95 GRRPCPDGSQENKKETRKNDLHP 27
GRR CPDGS E+K+ + P
Sbjct: 161 GRRNCPDGSDEHKEHGKCKQHQP 183
>U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon gene
protein 1 protein.
Length = 892
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 193 VLPTLAKAGWTLALSRAFLSDSDVIGPLIS*GLVAVRAQTDPRKTKRRH 47
V P KAGW + L D+ + G ++ V + P + K+RH
Sbjct: 726 VEPDSRKAGWAIVRFVGLLQDTTINGDSTDSKVLHVVVEGQPSRIKKRH 774
>AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein.
Length = 885
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 193 VLPTLAKAGWTLALSRAFLSDSDVIGPLIS*GLVAVRAQTDPRKTKRRH 47
V P KAGW + L D+ + G ++ V + P + K+RH
Sbjct: 719 VEPDSRKAGWAIVRFVGLLQDTTINGDSTDSKVLHVVVEGQPSRIKKRH 767
>AF038611-7|AAB92040.1| 466|Caenorhabditis elegans Hypothetical
protein E04A4.6 protein.
Length = 466
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 183 VGRTAGVQIWRIQNFEPIPVASEGIGKFYKG 275
VG AG Q +R++ P+P A +G Y G
Sbjct: 259 VGYKAGEQTYRVKGSIPVPFAVPTLGNCYSG 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,959,688
Number of Sequences: 27780
Number of extensions: 450040
Number of successful extensions: 1494
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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