Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00886
         (761 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   1.9  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    25   2.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   5.9  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/63 (30%), Positives = 25/63 (39%)
 Frame = +1

Query: 190 EAAIGIKSCDPEAPLMMYVSKMCRPPTKVVSTPLDAFSLARLLPDKKLASWDQTLHLERK 369
           EAA      +P A      +    P   VV+ P+DA S A L+   +      T  LE  
Sbjct: 65  EAAEAAMDLEPPAAAQPTPTASPVPGNMVVAGPIDAGSCALLMAQLQNIGAQLTTALEEL 124

Query: 370 RTC 378
           R C
Sbjct: 125 RLC 127


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 223 QDHSS*YQWQLHHRGVPRITSPYDISGPLQVMVNEWQSS 107
           QD     Q QLHH+G   + SP+       V V+++ +S
Sbjct: 63  QDTVGTAQHQLHHQGHSPVASPHSALSLSPVSVSKFDTS 101


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 455  HLWSRWSRSVLS 490
            H+W+RW R  LS
Sbjct: 1639 HIWNRWHREYLS 1650


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,560
Number of Sequences: 2352
Number of extensions: 18001
Number of successful extensions: 66
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)