Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00886
(761 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 164 5e-41
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 164 5e-41
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 66 3e-11
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 66 3e-11
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 33 0.22
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 33 0.22
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 33 0.29
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z81493-4|CAB04041.1| 165|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 29 2.7
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 29 2.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.8
Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical pr... 28 6.3
U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting... 28 6.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 6.3
AC006648-12|AAF39861.4| 418|Caenorhabditis elegans Btb and math... 28 6.3
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 28 8.3
AF068712-1|AAC17779.1| 500|Caenorhabditis elegans Hypothetical ... 28 8.3
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 28 8.3
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 164 bits (399), Expect = 5e-41
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +2
Query: 509 TFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINVESGEHIV 688
T+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI ESGEHI+
Sbjct: 481 TYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGEHII 540
Query: 689 AGAGELHLEICLKDLEEDHACIPI 760
AGAGELHLEICLKDLEEDHACIP+
Sbjct: 541 AGAGELHLEICLKDLEEDHACIPL 564
Score = 160 bits (388), Expect = 1e-39
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +3
Query: 255 VPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAI 434
VPTSDKGRFYAFGRVFSGKV TG KARI GPN+ PGKKEDLYEKTIQRTILMMGR++E I
Sbjct: 396 VPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVPGKKEDLYEKTIQRTILMMGRFIEPI 455
Query: 435 EDVPSGNICGLVGVDQFLVKTGTIT 509
ED+PSGNI GLVGVDQ+LVK GTIT
Sbjct: 456 EDIPSGNIAGLVGVDQYLVKGGTIT 480
Score = 139 bits (337), Expect = 2e-33
Identities = 58/85 (68%), Positives = 72/85 (84%)
Frame = +1
Query: 1 KKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGP 180
+K+G+ + +++ D +GK L+KV MR WLPAG+ +LQMIA HLPSPV AQKYRMEMLYEGP
Sbjct: 311 EKLGIKLANDEKDLEGKPLMKVFMRKWLPAGDTMLQMIAFHLPSPVTAQKYRMEMLYEGP 370
Query: 181 HDDEAAIGIKSCDPEAPLMMYVSKM 255
HDDEAA+ IK+CDP PLMMY+SKM
Sbjct: 371 HDDEAAVAIKTCDPNGPLMMYISKM 395
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 164 bits (399), Expect = 5e-41
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +2
Query: 509 TFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINVESGEHIV 688
T+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI ESGEHI+
Sbjct: 481 TYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGEHII 540
Query: 689 AGAGELHLEICLKDLEEDHACIPI 760
AGAGELHLEICLKDLEEDHACIP+
Sbjct: 541 AGAGELHLEICLKDLEEDHACIPL 564
Score = 160 bits (388), Expect = 1e-39
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +3
Query: 255 VPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAI 434
VPTSDKGRFYAFGRVFSGKV TG KARI GPN+ PGKKEDLYEKTIQRTILMMGR++E I
Sbjct: 396 VPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVPGKKEDLYEKTIQRTILMMGRFIEPI 455
Query: 435 EDVPSGNICGLVGVDQFLVKTGTIT 509
ED+PSGNI GLVGVDQ+LVK GTIT
Sbjct: 456 EDIPSGNIAGLVGVDQYLVKGGTIT 480
Score = 139 bits (337), Expect = 2e-33
Identities = 58/85 (68%), Positives = 72/85 (84%)
Frame = +1
Query: 1 KKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGP 180
+K+G+ + +++ D +GK L+KV MR WLPAG+ +LQMIA HLPSPV AQKYRMEMLYEGP
Sbjct: 311 EKLGIKLANDEKDLEGKPLMKVFMRKWLPAGDTMLQMIAFHLPSPVTAQKYRMEMLYEGP 370
Query: 181 HDDEAAIGIKSCDPEAPLMMYVSKM 255
HDDEAA+ IK+CDP PLMMY+SKM
Sbjct: 371 HDDEAAVAIKTCDPNGPLMMYISKM 395
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 66.1 bits (154), Expect = 3e-11
Identities = 26/75 (34%), Positives = 52/75 (69%)
Frame = +2
Query: 515 KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINVESGEHIVAG 694
++ + + +KF+ V++AVEP NP++LPK+++GL+++ KS P++ ESGEH++ G
Sbjct: 576 EDVYIFRPLKFNTRSCVKLAVEPINPSELPKMLDGLRKVNKSYPLLTTRVEESGEHVLLG 635
Query: 695 AGELHLEICLKDLEE 739
GE +++ + D+ +
Sbjct: 636 TGEFYMDCVMHDMRK 650
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/86 (32%), Positives = 46/86 (53%)
Frame = +3
Query: 249 QDVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMGRYVE 428
++ P D +F+ FGRV SG + R++G N++ +ED T+ R + + Y
Sbjct: 484 KNYPVDDATQFHVFGRVMSGTLEANTDVRVLGENYSIQDEEDCRRMTVGRLFVRVASYQI 543
Query: 429 AIEDVPSGNICGLVGVDQFLVKTGTI 506
+ VP+G + G+DQ +VKT TI
Sbjct: 544 EVSRVPAGCWVLIEGIDQPIVKTATI 569
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/83 (22%), Positives = 46/83 (55%)
Frame = +1
Query: 4 KIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPH 183
++G+ + E+ + + L+ ++ + + A + ++ ++ SP+ K ++E Y GP
Sbjct: 402 ELGIRLSKEEQKMNVRPLIALICKRFFGDFSAFVDLVVQNIKSPLENAKTKIEQTYLGPA 461
Query: 184 DDEAAIGIKSCDPEAPLMMYVSK 252
D + A ++ C+ E PLM++ +K
Sbjct: 462 DSQLAQEMQKCNAEGPLMVHTTK 484
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 66.1 bits (154), Expect = 3e-11
Identities = 26/75 (34%), Positives = 52/75 (69%)
Frame = +2
Query: 515 KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINVESGEHIVAG 694
++ + + +KF+ V++AVEP NP++LPK+++GL+++ KS P++ ESGEH++ G
Sbjct: 451 EDVYIFRPLKFNTRSCVKLAVEPINPSELPKMLDGLRKVNKSYPLLTTRVEESGEHVLLG 510
Query: 695 AGELHLEICLKDLEE 739
GE +++ + D+ +
Sbjct: 511 TGEFYMDCVMHDMRK 525
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/86 (32%), Positives = 46/86 (53%)
Frame = +3
Query: 249 QDVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMGRYVE 428
++ P D +F+ FGRV SG + R++G N++ +ED T+ R + + Y
Sbjct: 359 KNYPVDDATQFHVFGRVMSGTLEANTDVRVLGENYSIQDEEDCRRMTVGRLFVRVASYQI 418
Query: 429 AIEDVPSGNICGLVGVDQFLVKTGTI 506
+ VP+G + G+DQ +VKT TI
Sbjct: 419 EVSRVPAGCWVLIEGIDQPIVKTATI 444
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/83 (22%), Positives = 46/83 (55%)
Frame = +1
Query: 4 KIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPH 183
++G+ + E+ + + L+ ++ + + A + ++ ++ SP+ K ++E Y GP
Sbjct: 277 ELGIRLSKEEQKMNVRPLIALICKRFFGDFSAFVDLVVQNIKSPLENAKTKIEQTYLGPA 336
Query: 184 DDEAAIGIKSCDPEAPLMMYVSK 252
D + A ++ C+ E PLM++ +K
Sbjct: 337 DSQLAQEMQKCNAEGPLMVHTTK 359
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +2
Query: 557 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INVESGEHIVAGAGELHLEICLKDL 733
PV+ +A++P N D ++ L R K DP + N E+ E IV+G GELHLEI + +
Sbjct: 446 PVISMAIKPVNRKDADNFIKALTRFTKEDPTFRREYNQEAKETIVSGMGELHLEIYAQRM 505
Query: 734 EEDHAC 751
+ ++ C
Sbjct: 506 KSEYNC 511
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = +2
Query: 530 MKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINVESGEHIVAGAGELH 709
+K+ + +VRV++ + D+ L E LK LA D ++ + +E+GE + AGE+H
Sbjct: 467 LKIGSQTGEALVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVH 526
Query: 710 LEICLKDLEE 739
L+ C+KDL +
Sbjct: 527 LQKCIKDLND 536
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = +2
Query: 530 MKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINVESGEHIVAGAGELH 709
+K+ + +VRV++ + D+ L E LK LA D ++ + +E+GE + AGE+H
Sbjct: 467 LKIGSQTGEALVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVH 526
Query: 710 LEICLKDLEE 739
L+ C+KDL +
Sbjct: 527 LQKCIKDLND 536
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -1
Query: 269 VGGRHILLTYIISGASGSQLLIPMAASSSWGPSYNISIRYFWATTGDGK*MAII*SRASP 90
+ G H+ + +GS ++ + G Y ++ FW T G + ++ ++ P
Sbjct: 151 ISGEHMGALAMSEAQAGSDVVSMKLRAEKKGDKYVLNGTKFWITNGPDADVLVVYAKTDP 210
Query: 89 AGNQERITTF--SKALPSLSES 30
+ +Q IT F K P S+S
Sbjct: 211 SKHQHGITCFLVEKNTPGFSQS 232
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -1
Query: 269 VGGRHILLTYIISGASGSQLLIPMAASSSWGPSYNISIRYFWATTGDGK*MAII*SRASP 90
+ G H+ + +GS ++ + G Y ++ FW T G + ++ ++ P
Sbjct: 151 ISGEHMGALAMSEAQAGSDVVSMKLRAEKKGDKYVLNGTKFWITNGPDADVLVVYAKTDP 210
Query: 89 AGNQERITTF--SKALPSLSES 30
+ +Q IT F K P S+S
Sbjct: 211 SKHQHGITCFLVEKNTPGFSQS 232
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 575 VEPKNPADLPKLVEGLKRLAKSDPMVQC-INVESGEHIVAGAGELHLEICLKD 730
+EP + L + + L+ L + DP ++ + ++G+ IV GELHLE +KD
Sbjct: 399 IEPPSNRQLNQFNKALEELTREDPSMKIRFDRDTGQTIVETQGELHLE-AIKD 450
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 521 AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPM-VQCINVESGE 679
A + F +P V V + NP L +L+E ++++ K + + ++ + V+S +
Sbjct: 71 AQGKTTITFQTTPAVMVCISKANPEALAQLIEAIRKIVKGENVDIEKVKVKSSD 124
>Z81493-4|CAB04041.1| 165|Caenorhabditis elegans Hypothetical
protein F01D5.5 protein.
Length = 165
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -2
Query: 544 FHHLHVVGILESVIVPVLTKN*STPTRPQMLPEGTSSIASTXXXXXXXXXXXVFSYKSSF 365
F L + + + V L +N +T T + +S+ S+ S K+
Sbjct: 9 FVTLFALALCQEDYVEELAENTTTTTEGSTVSSDSSTAGSSEAPCQDDPSTDCASLKN-L 67
Query: 364 FPGVKFGPMMRAFCPVT--TLPEKTRPK 287
K+ PM++AFCPVT P T P+
Sbjct: 68 CTNSKYTPMLKAFCPVTCNMCPGATTPE 95
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 654 CTMGSDLARRLRPSTSLGRS 595
C MGS+ A+RLRP + GRS
Sbjct: 202 CVMGSEDAQRLRPDRAFGRS 221
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Frame = +2
Query: 458 LWSRWSRSVLSQDWYNHTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLP--KLVEGLKRL 631
LWS W + L H +N ++ +V P + N +L K+ E ++L
Sbjct: 358 LWSFWKKRALHVRKQAHGTQNGSGRWIVALAVLPYSDLLASGSNEGELKLWKISENFRQL 417
Query: 632 ----AKSDP-MVQCIN-VESGEHIVAGAGELH 709
+ S P + IN +G+ IV GAG+ H
Sbjct: 418 TPFFSYSIPGFINSINFAPNGKSIVVGAGKEH 449
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Frame = +2
Query: 458 LWSRWSRSVLSQDWYNHTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLP--KLVEGLKRL 631
LWS W + L H +N ++ +V P + N +L K+ E ++L
Sbjct: 358 LWSFWKKRALHVRKQAHGTQNGSGRWIVALAVLPYSDLLASGSNEGELKLWKISENFRQL 417
Query: 632 ----AKSDP-MVQCIN-VESGEHIVAGAGELH 709
+ S P + IN +G+ IV GAG+ H
Sbjct: 418 TPFFSYSIPGFINSINFAPNGKSIVVGAGKEH 449
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 618 PSTSLGRSAGFLGSTATRTTGDTLN 544
PSTS G AGFL STA + G N
Sbjct: 142 PSTSSGLPAGFLNSTANSSVGANNN 166
>Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical
protein C07A9.7b protein.
Length = 457
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +3
Query: 414 GRYVEAIEDVPSGN-ICGLVGV 476
GR+VEAIED+P G +C G+
Sbjct: 29 GRFVEAIEDIPIGTVVCVETGI 50
>Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical
protein C07A9.7a protein.
Length = 465
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +3
Query: 414 GRYVEAIEDVPSGN-ICGLVGV 476
GR+VEAIED+P G +C G+
Sbjct: 29 GRFVEAIEDIPIGTVVCVETGI 50
>U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting
protein protein16, isoform j protein.
Length = 716
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 497 WYNHTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEG 619
W T A V ++S PVVR P P D P +G
Sbjct: 51 WSTMTSHIATETSVNRWSTEPVVREEGRPPGPEDFPSTKQG 91
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/83 (25%), Positives = 31/83 (37%)
Frame = -1
Query: 284 VETTFVGGRHILLTYIISGASGSQLLIPMAASSSWGPSYNISIRYFWATTGDGK*MAII* 105
+ TT+ T + SG S + + SSS PS +++ T+G I
Sbjct: 753 LNTTYCNNLAASSTTMTSGVYSSTVTVTTQGSSSQAPSSTVTVPTTGTTSGAASTTGSIT 812
Query: 104 SRASPAGNQERITTFSKALPSLS 36
S ITT S + P S
Sbjct: 813 STQQATSTSSVITTGSTSAPQSS 835
>AC006648-12|AAF39861.4| 418|Caenorhabditis elegans Btb and math
domain containingprotein 19 protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 503 NHTFKNAHNMKVMKFSVSPVVRVA 574
+HTFKN MK+ K +SPV + A
Sbjct: 15 SHTFKNVSKMKIDKSLISPVKKHA 38
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 708 WSSPAPATMCSPDSTLIHCT 649
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>AF068712-1|AAC17779.1| 500|Caenorhabditis elegans Hypothetical
protein T09H2.1 protein.
Length = 500
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 620 LKRLAKSDPMVQCINVESGEHIVAGAGELHLEICLKDLEED 742
+ RL++ + + +ESGEH++ G G ++ + +E+D
Sbjct: 244 IHRLSQRNVQRRMEQIESGEHVIDGDGTDFMDTYINKIEKD 284
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 708 WSSPAPATMCSPDSTLIHCT 649
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,894,409
Number of Sequences: 27780
Number of extensions: 422276
Number of successful extensions: 1228
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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