Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00883
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.4  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   5.8  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   5.8  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   5.8  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   7.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 578 FFLSKSMIYSISNKKIVLYKYIIISYLLCTDP 483
           FFL   +I+ I    I++  YI+I+  L   P
Sbjct: 237 FFLGSILIFFIFPLAILIIVYILIAKTLMHHP 268


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 275 NLTQLKNNLFNYHFY 319
           +L Q+KNNL   +FY
Sbjct: 309 SLRQMKNNLERIYFY 323


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 275 NLTQLKNNLFNYHFY 319
           +L Q+KNNL   +FY
Sbjct: 309 SLRQMKNNLERIYFY 323


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 275 NLTQLKNNLFNYHFY 319
           +L Q+KNNL   +FY
Sbjct: 309 SLRQMKNNLERIYFY 323


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
          transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 21 PLVSPHG*VPPP 56
          P V PH  VPPP
Sbjct: 12 PTVLPHQEVPPP 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,196
Number of Sequences: 336
Number of extensions: 2668
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)