Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00883
         (588 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC105969-1|AAI05970.1|  149|Homo sapiens CHM protein protein.          30   5.3  
BC073987-1|AAH73987.1|  149|Homo sapiens CHM protein protein.          30   5.3  
BC065702-1|AAH65702.1|  149|Homo sapiens CHM protein protein.          30   5.3  
AK095883-1|BAC04640.1|  149|Homo sapiens protein ( Homo sapiens ...    30   5.3  

>BC105969-1|AAI05970.1|  149|Homo sapiens CHM protein protein.
          Length = 149

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 587 FFFFFLSKSMIYSISNKKIVLYKYIIISYLLCT 489
           + FFFL+ S +Y +S       KYI+++Y  C+
Sbjct: 3   YLFFFLTTSGLYCLSGSHGSNVKYIVLTYFNCS 35


>BC073987-1|AAH73987.1|  149|Homo sapiens CHM protein protein.
          Length = 149

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 587 FFFFFLSKSMIYSISNKKIVLYKYIIISYLLCT 489
           + FFFL+ S +Y +S       KYI+++Y  C+
Sbjct: 3   YLFFFLTTSGLYCLSGSHGSNVKYIVLTYFNCS 35


>BC065702-1|AAH65702.1|  149|Homo sapiens CHM protein protein.
          Length = 149

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 587 FFFFFLSKSMIYSISNKKIVLYKYIIISYLLCT 489
           + FFFL+ S +Y +S       KYI+++Y  C+
Sbjct: 3   YLFFFLTTSGLYCLSGSHGSNVKYIVLTYFNCS 35


>AK095883-1|BAC04640.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38564 fis, clone HCHON2004359. ).
          Length = 149

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 587 FFFFFLSKSMIYSISNKKIVLYKYIIISYLLCT 489
           + FFFL+ S +Y +S       KYI+++Y  C+
Sbjct: 3   YLFFFLTTSGLYCLSGSHGSNVKYIVLTYFNCS 35


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,761,084
Number of Sequences: 237096
Number of extensions: 1484942
Number of successful extensions: 1669
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1669
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)