Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00882
         (375 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    56   1e-08
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    48   2e-06
U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical pr...    36   0.007
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    30   0.62 
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    30   0.62 
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    30   0.62 
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    30   0.62 
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    27   4.4  
Z69386-1|CAA93430.1|  241|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z48006-1|CAA88047.1|  642|Caenorhabditis elegans Hypothetical pr...    27   5.8  
U46675-2|AAB52644.1|  125|Caenorhabditis elegans Hypothetical pr...    27   5.8  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 55.6 bits (128), Expect = 1e-08
 Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = +2

Query: 74  TFMCAGGEPDK-DTCRGDGGSPLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDV 244
           + +CAG    K D+C+GD G PL+C  D     +   G+V+WGIGC   G PGVY +V
Sbjct: 223 SMLCAGYSYGKIDSCQGDSGGPLMCARD---GHWELTGVVSWGIGCARPGMPGVYGNV 277


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 48.0 bits (109), Expect = 2e-06
 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +2

Query: 83  CAGG-EPDKDTCRGDGGSPLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVS 247
           CAG  E   D+C+GD G P  C    E   +V  G+++WG GC +   PG+Y  V+
Sbjct: 197 CAGYLEGGIDSCQGDSGGPFACR--REDGAFVLAGVISWGDGCAQKKQPGIYTMVA 250


>U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical
           protein F48E3.4 protein.
          Length = 279

 Score = 36.3 bits (80), Expect = 0.007
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +2

Query: 113 CRGDGGSPLVCPIDYEKNRYVQYGIVA 193
           C  D G+PL C +D E N+YVQ GIV+
Sbjct: 197 CWDDIGAPLECVLDVENNKYVQVGIVS 223


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 0.62
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 71  STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 199
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 0.62
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 71  STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 199
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 0.62
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 71  STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 199
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 0.62
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 71  STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 199
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 83  CAGGEPDKDTCRGDGGSPLVCPIDYEKNRYVQYGIVAWGIGC 208
           C   E DK+ C GD G  L          ++   IV++G  C
Sbjct: 260 CTAEEEDKNVCSGDSGGGLTFHQSDSAREFI-IAIVSYGSDC 300


>Z69386-1|CAA93430.1|  241|Caenorhabditis elegans Hypothetical
           protein ZK596.1 protein.
          Length = 241

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 76  VHVRGGGARQGHLPGGRGVAPRVP 147
           V + G G R GH  GG G AP++P
Sbjct: 17  VVLAGPGGRHGHGGGGFGGAPQLP 40


>Z48006-1|CAA88047.1|  642|Caenorhabditis elegans Hypothetical
           protein F19C6.1 protein.
          Length = 642

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 101 DKDTCRGDGGSPLVCPIDYEKNRYVQYGIVAWGIGC 208
           D +  +G  G+      +  KN    YG+  WG+GC
Sbjct: 355 DNEPIKGRVGTVGYMAPEIVKNERYSYGVDWWGVGC 390


>U46675-2|AAB52644.1|  125|Caenorhabditis elegans Hypothetical
           protein F35A5.5 protein.
          Length = 125

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 10  PEHLPEPVEEDAAGAVLPVALDVHVRGG 93
           P  +P PV+ +     +PV + V +RGG
Sbjct: 38  PVPVPVPVQSNCCSCCMPVCMSVCMRGG 65


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,800,259
Number of Sequences: 27780
Number of extensions: 136575
Number of successful extensions: 437
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)