Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00880
         (667 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069358-1|AAL39503.1|  532|Drosophila melanogaster LD06275p pro...   130   2e-30
AE014297-2565|AAF55582.1|  726|Drosophila melanogaster CG7706-PA...   130   2e-30
AY061343-1|AAL28891.1|  178|Drosophila melanogaster LD27358p pro...    29   5.7  
AE013599-3195|AAF46720.1|  178|Drosophila melanogaster CG10795-P...    29   5.7  

>AY069358-1|AAL39503.1|  532|Drosophila melanogaster LD06275p
           protein.
          Length = 532

 Score =  130 bits (314), Expect = 2e-30
 Identities = 54/85 (63%), Positives = 68/85 (80%)
 Frame = +3

Query: 252 GMGEDADEEPDLVENPYAATANEELYLDDPKKTLRGYFEREGHELNYDCEERGIGQYICR 431
           GMG+DADEE DL  NPYA+T NEEL+ DDPKKTLRG+FEREG  L Y C+E   G ++CR
Sbjct: 47  GMGDDADEETDLSHNPYASTNNEELFFDDPKKTLRGFFEREGLNLEYKCDELSTGSFVCR 106

Query: 432 VELPMDDPHGRPVMAAVIHRGKKKE 506
           VELP+DD +GRP++  V H+G+KK+
Sbjct: 107 VELPLDDSNGRPIIVEVNHKGRKKD 131



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
 Frame = +2

Query: 509 VVACALEACRILDRAGLLRQAKHESRRRKQ---RDW-SADDYYDSDEDTFLEPHR 661
           VV CALEACR LDR G+LRQA  E+++RKQ   RD    D+++D   D   +  R
Sbjct: 133 VVQCALEACRTLDRHGVLRQANQEAQKRKQLKNRDSDDEDEFWDRTGDVARKKQR 187


>AE014297-2565|AAF55582.1|  726|Drosophila melanogaster CG7706-PA
           protein.
          Length = 726

 Score =  130 bits (314), Expect = 2e-30
 Identities = 54/85 (63%), Positives = 68/85 (80%)
 Frame = +3

Query: 252 GMGEDADEEPDLVENPYAATANEELYLDDPKKTLRGYFEREGHELNYDCEERGIGQYICR 431
           GMG+DADEE DL  NPYA+T NEEL+ DDPKKTLRG+FEREG  L Y C+E   G ++CR
Sbjct: 241 GMGDDADEETDLSHNPYASTNNEELFFDDPKKTLRGFFEREGLNLEYKCDELSTGSFVCR 300

Query: 432 VELPMDDPHGRPVMAAVIHRGKKKE 506
           VELP+DD +GRP++  V H+G+KK+
Sbjct: 301 VELPLDDSNGRPIIVEVNHKGRKKD 325



 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
 Frame = +1

Query: 16  YTRVRVGHQIKFGSSTRNYIVMGPDFDCEGESELSVTEIKQK----ALEMKAERDRMIKE 183
           Y R+RVGH +K G STR YI+ GP  D E ESELSVTE++QK      +   ER+  + E
Sbjct: 169 YIRMRVGHMLKLGGSTRVYILQGPGEDEEPESELSVTELRQKREKELADAAVERELRLLE 228

Query: 184 AIEQ 195
           A E+
Sbjct: 229 AEER 232



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
 Frame = +2

Query: 509 VVACALEACRILDRAGLLRQAKHESRRRKQ---RDW-SADDYYDSDEDTFLEPHR 661
           VV CALEACR LDR G+LRQA  E+++RKQ   RD    D+++D   D   +  R
Sbjct: 327 VVQCALEACRTLDRHGVLRQANQEAQKRKQLKNRDSDDEDEFWDRTGDVARKKQR 381


>AY061343-1|AAL28891.1|  178|Drosophila melanogaster LD27358p
           protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 10/24 (41%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 360 YFEREGHELNYDCEE-RGIGQYIC 428
           +F +E H++N DC E + +GQ++C
Sbjct: 11  FFAKETHQINVDCNELQMMGQFMC 34


>AE013599-3195|AAF46720.1|  178|Drosophila melanogaster CG10795-PA
           protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 10/24 (41%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 360 YFEREGHELNYDCEE-RGIGQYIC 428
           +F +E H++N DC E + +GQ++C
Sbjct: 11  FFAKETHQINVDCNELQMMGQFMC 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,329,051
Number of Sequences: 53049
Number of extensions: 528200
Number of successful extensions: 1571
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)