BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00875
(707 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domai... 26 1.3
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 25 2.3
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 25 2.3
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 3.1
AY823259-1|AAX18444.1| 194|Anopheles gambiae pburs protein. 24 4.1
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 24 4.1
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 24 4.1
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 24 4.1
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 24 4.1
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 5.4
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 5.4
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 24 5.4
L04753-1|AAA29357.1| 511|Anopheles gambiae alpha-amylase protein. 23 7.1
>DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 121
Score = 25.8 bits (54), Expect = 1.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 167 FTECHGSCDSGTIYNNQTGTHESACECC 250
+ EC SCD T N + G H + + C
Sbjct: 65 YNECGSSCDDRTCENIRRGDHLACTKHC 92
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 25.0 bits (52), Expect = 2.3
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 257 RSTAACPCDSRAKTGRSDR-TGSPRRRAATVPPADPDSLSTLNLVTHPTLVP 409
RS A CP D+ G D S ++ P +++L TL+P
Sbjct: 785 RSPARCPADTNGDAGTPDNPLSSSSTSSSLYPNGSIGGVNSLAAAAAATLIP 836
Score = 24.6 bits (51), Expect = 3.1
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 396 GCVTRFRVLSESGSA-GGTVAARRRGDPVRSDRPVFARESHGHAAVLRA*QHSHADS 229
G +T+ R S+ A G V ARR DP + P + G A + + + S DS
Sbjct: 663 GSMTKTRSYSDIKEATSGGVMARRSSDPSMTLDPSIINRTGGPATLNLSQEESSIDS 719
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 25.0 bits (52), Expect = 2.3
Identities = 13/51 (25%), Positives = 20/51 (39%)
Frame = +2
Query: 257 RSTAACPCDSRAKTGRSDRTGSPRRRAATVPPADPDSLSTLNLVTHPTLVP 409
RS A CP D+ G S ++ P +++L TL+P
Sbjct: 785 RSPARCPADTNGDAGTPGNPLSSSTSSSLYPNGSIGGVNSLAAAAAATLIP 835
Score = 24.6 bits (51), Expect = 3.1
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 396 GCVTRFRVLSESGSA-GGTVAARRRGDPVRSDRPVFARESHGHAAVLRA*QHSHADS 229
G +T+ R S+ A G V ARR DP + P + G A + + + S DS
Sbjct: 663 GSMTKTRSYSDIKEATSGGVMARRSSDPSMTLDPSIINRTGGPATLNLSQEESSIDS 719
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.6 bits (51), Expect = 3.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 134 GLCVNKFPITGFTECHGSCDSGTIYNNQT 220
G C+ F T F EC+G Y QT
Sbjct: 957 GSCLEDFRATPFIECNGGKGHCHYYETQT 985
>AY823259-1|AAX18444.1| 194|Anopheles gambiae pburs protein.
Length = 194
Score = 24.2 bits (50), Expect = 4.1
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +1
Query: 262 YSGVSVRLTCEDGTVRPHRVATPARCHCAACG 357
Y VR+T + R+ P C C CG
Sbjct: 159 YDPDGVRMTDHESATMEIRLKEPVDCKCFKCG 190
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.2 bits (50), Expect = 4.1
Identities = 9/31 (29%), Positives = 12/31 (38%)
Frame = +1
Query: 79 EHPELRHCRSDPHPDGSPRPVRQQVPHHRLH 171
+HP +S HP + Q HH H
Sbjct: 258 QHPSSHQQQSQQHPSSQHQQPTHQTHHHHHH 288
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 24.2 bits (50), Expect = 4.1
Identities = 9/31 (29%), Positives = 12/31 (38%)
Frame = +1
Query: 79 EHPELRHCRSDPHPDGSPRPVRQQVPHHRLH 171
+HP +S HP + Q HH H
Sbjct: 258 QHPSSHQQQSQQHPSSQHQQPTHQTHHHHHH 288
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 24.2 bits (50), Expect = 4.1
Identities = 9/31 (29%), Positives = 12/31 (38%)
Frame = +1
Query: 79 EHPELRHCRSDPHPDGSPRPVRQQVPHHRLH 171
+HP +S HP + Q HH H
Sbjct: 210 QHPSSHQQQSQQHPSSQHQQPTHQTHHHHHH 240
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 24.2 bits (50), Expect = 4.1
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 10/62 (16%)
Frame = +2
Query: 242 ECCQARSTAACPCDSRAK----------TGRSDRTGSPRRRAATVPPADPDSLSTLNLVT 391
E C+A STA+ C + T +DRT +P AT P + N+
Sbjct: 768 ENCEAGSTASAECVTNGDYMLQPSNAPFTPPTDRTPTPPPLPATAEPMGDYMIQPSNIPV 827
Query: 392 HP 397
HP
Sbjct: 828 HP 829
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 112 PHPDGSPRPVRQQVPHHRLHGV 177
P P G P P+R Q+P + G+
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGM 240
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.8 bits (49), Expect = 5.4
Identities = 23/89 (25%), Positives = 31/89 (34%), Gaps = 5/89 (5%)
Frame = +2
Query: 29 CQIC----NEKPQALSKCVPKSIPSSDTVGLIRIPMGAH-GLCVNKFPITGFTECHGSCD 193
CQ C N P A+ C + + + + I G H C+ E HGSC+
Sbjct: 827 CQPCDCNGNVDPNAVGNC---NRTTGECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCE 883
Query: 194 SGTIYNNQTGTHESACECCQARSTAACPC 280
+ Y T E C A C C
Sbjct: 884 ECSCYPRGTEQTEKGISICDA-INGNCHC 911
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.4
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -3
Query: 222 PVWLL*IVPESQEPWHSVKPVMGNLLTHRPWAPIGMRIRPTVS 94
P W + +P + PWH P G RPW RPT S
Sbjct: 82 PWWSVPGIPPFRPPWHPRPPFGG-----RPWWLRPPFHRPTTS 119
>L04753-1|AAA29357.1| 511|Anopheles gambiae alpha-amylase protein.
Length = 511
Score = 23.4 bits (48), Expect = 7.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 498 ESWFLLASPEALEYIRDH 445
E+W LLAS EA ++ +H
Sbjct: 300 EAWRLLASREAFVFVDNH 317
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,073
Number of Sequences: 2352
Number of extensions: 16738
Number of successful extensions: 44
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -