Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00874X
         (302 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical...    31   0.21 
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    26   6.0  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    26   6.0  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    26   6.0  
AF039038-6|AAK21431.2|  629|Caenorhabditis elegans Hypothetical ...    26   6.0  
Z81519-2|CAB04217.1|  468|Caenorhabditis elegans Hypothetical pr...    25   7.9  

>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
            protein Y45F10B.10 protein.
          Length = 1592

 Score = 30.7 bits (66), Expect = 0.21
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -2

Query: 160  YHGSSSQL*HNAAGH*ISVVCLCSSGCASCRYSR*AETEHGSH*WSQQTPS 8
            YH +S QL     GH  +V CLCSS  +S   S   +       +SQ TP+
Sbjct: 896  YHIASEQLIGTFKGHTAAVTCLCSSNDSSLFVSTSFDKTVNVWVFSQSTPT 946


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 228 EKVRSWSDVENG*CLASPHGVGATMAAAVN 139
           E V SW+   N   L SPH VG + +   N
Sbjct: 581 ENVHSWNKFANVLYLESPHQVGYSYSTVAN 610


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 228 EKVRSWSDVENG*CLASPHGVGATMAAAVN 139
           E V SW+   N   L SPH VG + +   N
Sbjct: 581 ENVHSWNKFANVLYLESPHQVGYSYSTVAN 610


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 228 EKVRSWSDVENG*CLASPHGVGATMAAAVN 139
           E V SW+   N   L SPH VG + +   N
Sbjct: 581 ENVHSWNKFANVLYLESPHQVGYSYSTVAN 610


>AF039038-6|AAK21431.2|  629|Caenorhabditis elegans Hypothetical
           protein K06A5.1 protein.
          Length = 629

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +1

Query: 31  SGSRARFQLSGNSG 72
           S SR RF+LSGNSG
Sbjct: 308 SRSRGRFELSGNSG 321


>Z81519-2|CAB04217.1|  468|Caenorhabditis elegans Hypothetical
           protein F29C12.5 protein.
          Length = 468

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 246 KCIKFLINLSMRCKKKKKK 302
           KC++FLI+LS +  K+K K
Sbjct: 388 KCVEFLIDLSEKSPKEKLK 406


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,099,171
Number of Sequences: 27780
Number of extensions: 128405
Number of successful extensions: 260
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)