Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00872
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             34   0.004
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    26   0.98 
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    26   0.98 
AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical prote...    26   0.98 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    24   5.2  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   6.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   6.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.1  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 34.3 bits (75), Expect = 0.004
 Identities = 13/52 (25%), Positives = 29/52 (55%)
 Frame = +3

Query: 330  EILRDKAENKPESAVAVHCVAGLGRAPVMVAIALIELGMKYEEAVETIRDQR 485
            ++ + K +   +  + VHC AG+GR  V + ++++   M+YE  ++  +  R
Sbjct: 1145 QVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVLDVFQTVR 1196



 Score = 27.9 bits (59), Expect = 0.32
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 339 RDKAENKPESA-VAVHCVAGLGRAPVMVAIALIELGMKYEEAVE 467
           R K     ES  + VHC AG+G     + I  +   MKYE+ ++
Sbjct: 856 RTKVVTPSESGPIIVHCSAGVGVTGCFIVIDSMLERMKYEKTID 899


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 270 HLDVLAFSGAVS*LGSHTRTTVHTLC 193
           H + L  SG V   GSH +++VH LC
Sbjct: 24  HREHLHESGFVRRQGSHAKSSVHKLC 49


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 270 HLDVLAFSGAVS*LGSHTRTTVHTLC 193
           H + L  SG V   GSH +++VH LC
Sbjct: 24  HREHLHESGFVRRQGSHAKSSVHKLC 49


>AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical protein
           protein.
          Length = 89

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 270 HLDVLAFSGAVS*LGSHTRTTVHTLC 193
           H + L  SG V   GSH +++VH LC
Sbjct: 24  HREHLHESGFVRRQGSHAKSSVHKLC 49


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +3

Query: 402 RAPVMVAIALIELGMKYEEAVETIRDQRRGAINAKHSRTWRSTDRSHVSR 551
           R P   A  L+   +     +  I++    AIN +  R +R  +R H++R
Sbjct: 328 RLPAKAAKQLVGQKLTVSCCISNIKEAP--AINLQQQRCYRCLERGHIAR 375


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 372 VAVHCVAGLGRAPVMVAIALIELGMKYEEAVETIR 476
           V VHC  G  R P +VA A + L   Y   +E  R
Sbjct: 416 VLVHCSDGWDRTPQIVATAQLCLD-PYYRTIEGFR 449


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 372 VAVHCVAGLGRAPVMVAIALIELGMKYEEAVETIR 476
           V VHC  G  R P +VA A + L   Y   +E  R
Sbjct: 416 VLVHCSDGWDRTPQIVATAQLCLD-PYYRTIEGFR 449


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 467  LDGLLVLHAELDE 429
            LDG L++HAE DE
Sbjct: 1246 LDGELIIHAEEDE 1258


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,429
Number of Sequences: 2352
Number of extensions: 12298
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)