Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00869
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066648-1|AAH66648.1| 1064|Homo sapiens MAP2 protein protein.         31   1.7  
U89330-1|AAB48098.1| 1824|Homo sapiens microtubule-associated pr...    31   3.1  
U01828-1|AAA03354.1| 1826|Homo sapiens microtubule-associated pr...    31   3.1  
M25668-1|AAA59552.1| 1069|Homo sapiens MAP2 protein.                   31   3.1  

>BC066648-1|AAH66648.1| 1064|Homo sapiens MAP2 protein protein.
          Length = 1064

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 24/71 (33%), Positives = 30/71 (42%)
 Frame = +1

Query: 49   SKSFDVSVTKSVNDKFETAPIKSEDIEDKKERDKSLGITTDSTRTQHRGTPRALTLAELE 228
            SK FD    K  ND+ +T   KSE+  D KE  K      D   T   G      LA  +
Sbjct: 947  SKEFDQE--KKANDRLDTVLEKSEEHADSKEHAKKTEEAGDEIETFRLGVTYEQALA--K 1002

Query: 229  DMKKPANAVVE 261
            D+  P +A  E
Sbjct: 1003 DLSIPTDASSE 1013


>U89330-1|AAB48098.1| 1824|Homo sapiens microtubule-associated protein
            2 protein.
          Length = 1824

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 24/71 (33%), Positives = 30/71 (42%)
 Frame = +1

Query: 49   SKSFDVSVTKSVNDKFETAPIKSEDIEDKKERDKSLGITTDSTRTQHRGTPRALTLAELE 228
            SK FD    K  ND+ +T   KSE+  D KE  K      D   T   G      LA  +
Sbjct: 943  SKEFDQE--KKANDRLDTVLEKSEEHADSKEHAKKTEEAGDEIETFGLGVTYEQALA--K 998

Query: 229  DMKKPANAVVE 261
            D+  P +A  E
Sbjct: 999  DLSIPTDASSE 1009


>U01828-1|AAA03354.1| 1826|Homo sapiens microtubule-associated protein
            2 protein.
          Length = 1826

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 24/71 (33%), Positives = 30/71 (42%)
 Frame = +1

Query: 49   SKSFDVSVTKSVNDKFETAPIKSEDIEDKKERDKSLGITTDSTRTQHRGTPRALTLAELE 228
            SK FD    K  ND+ +T   KSE+  D KE  K      D   T   G      LA  +
Sbjct: 947  SKEFDQE--KKANDRLDTVLEKSEEHADSKEHAKKTEEAGDEIETFGLGVTYEQALA--K 1002

Query: 229  DMKKPANAVVE 261
            D+  P +A  E
Sbjct: 1003 DLSIPTDASSE 1013


>M25668-1|AAA59552.1| 1069|Homo sapiens MAP2 protein.
          Length = 1069

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 24/71 (33%), Positives = 30/71 (42%)
 Frame = +1

Query: 49  SKSFDVSVTKSVNDKFETAPIKSEDIEDKKERDKSLGITTDSTRTQHRGTPRALTLAELE 228
           SK FD    K  ND+ +T   KSE+  D KE  K      D   T   G      LA  +
Sbjct: 454 SKEFDQE--KKANDRLDTVLEKSEEHADSKEHAKKTEEAGDEIETFGLGVTYEQALA--K 509

Query: 229 DMKKPANAVVE 261
           D+  P +A  E
Sbjct: 510 DLSIPTDASSE 520


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,232,392
Number of Sequences: 237096
Number of extensions: 940520
Number of successful extensions: 2124
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2124
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)