Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00869
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical pr... 31 0.36
Z50742-2|CAA90616.1| 491|Caenorhabditis elegans Hypothetical pr... 31 0.63
U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protei... 30 0.84
U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protei... 30 0.84
AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E prot... 30 0.84
AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E prot... 30 0.84
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical p... 28 3.4
Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical p... 28 3.4
Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical p... 28 4.5
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 28 4.5
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 28 4.5
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 28 4.5
AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical ... 28 4.5
Z82060-4|CAB04885.2| 434|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical
protein C38D9.2 protein.
Length = 593
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +1
Query: 64 VSVTKSVNDKFETAPIKSEDI--EDKKERDKSLGITTDSTRTQHRGTPRAL 210
+S TKS++ +++PIKS+ E+ E+D S TT+ T + P+A+
Sbjct: 230 MSPTKSIHSN-QSSPIKSDGYSSENSNEQDSSFETTTEETPLPEKSPPKAV 279
>Z50742-2|CAA90616.1| 491|Caenorhabditis elegans Hypothetical
protein K09A11.2 protein.
Length = 491
Score = 30.7 bits (66), Expect = 0.63
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 141 LFLIFYVFRFYWRRFKF 91
+F+IFYVF FYW+ K+
Sbjct: 10 IFIIFYVFHFYWKVSKY 26
>U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protein
1, isoform b protein.
Length = 521
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 58 FDVSVTKSVNDKFETAPIKSEDIEDKKERDKSLGITTDSTRTQHRGT-PRALTLAELEDM 234
FD VNDK E I+SED +D +++ +T +H T P L+ A+ + +
Sbjct: 165 FDDEEEDVVNDKEEYEEIESEDEDDYPVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGI 224
Query: 235 KKP 243
P
Sbjct: 225 GSP 227
>U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protein
1, isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 58 FDVSVTKSVNDKFETAPIKSEDIEDKKERDKSLGITTDSTRTQHRGT-PRALTLAELEDM 234
FD VNDK E I+SED +D +++ +T +H T P L+ A+ + +
Sbjct: 168 FDDEEEDVVNDKEEYEEIESEDEDDYPVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGI 227
Query: 235 KKP 243
P
Sbjct: 228 GSP 230
>AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 58 FDVSVTKSVNDKFETAPIKSEDIEDKKERDKSLGITTDSTRTQHRGT-PRALTLAELEDM 234
FD VNDK E I+SED +D +++ +T +H T P L+ A+ + +
Sbjct: 168 FDDEEEDVVNDKEEYEEIESEDEDDYPVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGI 227
Query: 235 KKP 243
P
Sbjct: 228 GSP 230
>AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 58 FDVSVTKSVNDKFETAPIKSEDIEDKKERDKSLGITTDSTRTQHRGT-PRALTLAELEDM 234
FD VNDK E I+SED +D +++ +T +H T P L+ A+ + +
Sbjct: 168 FDDEEEDVVNDKEEYEEIESEDEDDYPVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGI 227
Query: 235 KKP 243
P
Sbjct: 228 GSP 230
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 67 SVTKSVNDKFETAPIKSEDIED-KKERDKSLGITTDSTRTQH 189
++TK ++DK E +K+E++ED ++ SLG + +T+ H
Sbjct: 289 TLTKELSDKTELVKMKNEELEDLRQTTTASLGDSEQATKYLH 330
>Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 184 QHRGTPRALTLAELEDMKKPANAV 255
+H+GT + ++LAEL D+ KP V
Sbjct: 321 KHKGTKKKVSLAELLDLPKPGGKV 344
>Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 184 QHRGTPRALTLAELEDMKKPANAV 255
+H+GT + ++LAEL D+ KP V
Sbjct: 321 KHKGTKKKVSLAELLDLPKPGGKV 344
>Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical
protein H12C20.2a protein.
Length = 805
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 31 NTIHVESKSFDVSVTKSVNDKFETAPIKSEDIEDKKERD 147
N I +S + ++ T VN FET P++ +++E ++R+
Sbjct: 133 NIICRQSAARELGTTIIVNKLFETLPVRRKELERSQKRE 171
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 61 DVSVTKSVNDKFETAPIKSEDIEDKKERDKSLGITTDSTRT 183
DVS + + T+ +K E+ D+K R + L +++D + T
Sbjct: 188 DVSSSSRTSSSSSTSSMKQEETADEKSRKRKLIMSSDESST 228
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 61 DVSVTKSVNDKFETAPIKSEDIEDKKERDKSLGITTDSTRT 183
DVS + + T+ +K E+ D+K R + L +++D + T
Sbjct: 959 DVSSSSRTSSSSSTSSMKQEETADEKSRKRKLIMSSDESST 999
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 61 DVSVTKSVNDKFETAPIKSEDIEDKKERDKSLGITTDSTRT 183
DVS + + T+ +K E+ D+K R + L +++D + T
Sbjct: 956 DVSSSSRTSSSSSTSSMKQEETADEKSRKRKLIMSSDESST 996
>AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical
protein H12C20.2a protein.
Length = 805
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 31 NTIHVESKSFDVSVTKSVNDKFETAPIKSEDIEDKKERD 147
N I +S + ++ T VN FET P++ +++E ++R+
Sbjct: 133 NIICRQSAARELGTTIIVNKLFETLPVRRKELERSQKRE 171
>Z82060-4|CAB04885.2| 434|Caenorhabditis elegans Hypothetical
protein T27F6.6 protein.
Length = 434
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 309 HSTHLENVFDRELDLSFYHSISRFFHILKF 220
++THL +DRE DL H ++ F + +F
Sbjct: 168 YTTHLHAEYDRENDLYLPHRTAQAFELAQF 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,267,147
Number of Sequences: 27780
Number of extensions: 172008
Number of successful extensions: 576
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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