Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00867
         (758 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0734 - 23980576-23980671,23980799-23981338,23981493-239817...    30   2.3  
10_01_0111 + 1384737-1386215                                           29   5.3  
07_03_1348 + 25945444-25945551,25946411-25946607,25946732-259468...    28   7.0  
03_01_0131 - 1013982-1016246                                           28   7.0  
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458...    28   9.3  
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707...    28   9.3  

>06_03_0734 -
           23980576-23980671,23980799-23981338,23981493-23981714,
           23981791-23982144,23982460-23982546
          Length = 432

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 730 RSPTVQSVCLGQSVWQGESL-RMNLISDSAMFAGVGVEHSS 611
           RSPT  S+     V  GESL  + L  DSA  A    +H S
Sbjct: 169 RSPTTASIAASVEVQVGESLSNLRLSDDSAAAAATSAQHRS 209


>10_01_0111 + 1384737-1386215
          Length = 492

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 400 IDFVCYKDGDRIALFIAEG--GPECFQQKTENLKTCFLI*NRASPLWNP 540
           +D  CY+   + ALF+A+G  G    ++ +  ++ C +   R+ P W P
Sbjct: 186 MDMPCYEWEQKAALFVADGASGMSIMKRCSLAMERCTVAAMRSCPEWEP 234


>07_03_1348 +
           25945444-25945551,25946411-25946607,25946732-25946804,
           25947003-25947092,25947410-25947465,25947559-25947738,
           25947813-25948006,25948095-25948234,25948324-25948466,
           25948549-25948697,25948784-25949148,25949264-25949368
          Length = 599

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +3

Query: 561 EKCAKVDEMTSCIVKSLEECSTPTPANMAESLIKFMRKDSPCHTLCPRQTDCTVGLLSVN 740
           +K  + + M  C  + +      T A + +SL++ +   SP HT+   +TD  +   S N
Sbjct: 431 DKSTEDNNMEPCPGEDIPTSENLTEAAIEDSLLQCVEYSSPVHTVIQAKTDAEIA-ASEN 489

Query: 741 TSAI 752
            S +
Sbjct: 490 LSEV 493


>03_01_0131 - 1013982-1016246
          Length = 754

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 599 REIPRRVFHTDTRKHGGITDQVHA-QRLSLPHALPK 703
           RE    V H D R+ GG+ D V    R  LP A P+
Sbjct: 28  RERKNYVVHLDPREDGGVADSVELWHRSFLPEATPE 63


>10_08_0429 +
           17845303-17845431,17845508-17845684,17845782-17845895,
           17846386-17846520,17847659-17847790,17847919-17848071,
           17848574-17848709,17849338-17849443,17849538-17849730,
           17849803-17849963,17850227-17850442,17850732-17850997,
           17851505-17851779,17851871-17852327,17853973-17854055,
           17854260-17854469,17854897-17855373,17855462-17855743,
           17855910-17856236,17856418-17856507,17856788-17856899,
           17857004-17857104,17857524-17857568
          Length = 1458

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +1

Query: 367 INDAQNST--NQLIDFVCYKDGDRIALFIAEGGPECFQQKTENLKTCFLI*NR 519
           I+D++N T     IDF+C ++G+  A F+    PE       +    FLI N+
Sbjct: 661 IHDSENITLNTYRIDFLCDQEGENYAGFVLLMEPELDDDVAPSKMDLFLIPNK 713


>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
            27771407-27771773,27772104-27772217,27772307-27772403,
            27772968-27773088,27773168-27773252,27773349-27773498,
            27773630-27773746,27773819-27773905,27773981-27774049,
            27774125-27774181,27774266-27774349,27774477-27774513,
            27774721-27774869,27776053-27776538,27776743-27776886,
            27776961-27777509,27778332-27778526,27779226-27779310,
            27779570-27779670,27779689-27780360,27781101-27781433,
            27781957-27782038,27782258-27782334,27782713-27782817,
            27783810-27783944,27784437-27785159,27785882-27786663,
            27787480-27789187
          Length = 2891

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 77   LADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVD 208
            +AD   QI+A V  + T   A +    V+ A  ++G+C+  L +
Sbjct: 1320 MADSNGQISAAVMERLTSAAAAEPYESVKHAFVSYGSCIADLAE 1363


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,448,075
Number of Sequences: 37544
Number of extensions: 422395
Number of successful extensions: 1111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)