Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00866
         (299 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0069 - 11880841-11880936,11881150-11881221,11881263-118813...    28   1.6  
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420...    27   3.6  
07_03_0235 - 15564620-15564748,15565037-15565083,15565305-155653...    26   4.7  
07_01_0139 - 1014952-1015165,1015271-1015350,1015420-1015629,101...    25   8.3  
05_07_0287 + 28993615-28995617,28996464-28996524,28996603-28996830     25   8.3  

>08_02_0069 -
           11880841-11880936,11881150-11881221,11881263-11881343,
           11881471-11881542,11882549-11882770,11882849-11882941,
           11883509-11883601,11884546-11884632,11884958-11884990,
           11885091-11885185,11886590-11886674,11886778-11886864,
           11887757-11887846,11887929-11888057,11888668-11888757,
           11888849-11888908,11889074-11889311,11889852-11890054
          Length = 641

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +1

Query: 52  KSTTFLRNA*LLIESTEKCNNKVPDTECCRTNSSTHYYTVYYNNMLVNEQKY 207
           + T +  +A +L ES E+          C T     YY  YYN++ +NE  +
Sbjct: 134 RDTFWHSSAHILGESLERAYGCKLCIGPCTTRGEGFYYDAYYNDLTLNETHF 185


>04_04_1457 - 33741048-33741146,33741647-33741760,33741938-33742052,
            33742154-33742560,33743342-33743476,33743576-33743970,
            33744225-33744916,33745014-33745097,33745195-33745286,
            33745374-33745457,33745535-33745714,33746258-33746302,
            33746399-33746692,33747199-33747585,33747713-33747899,
            33748042-33748118,33748936-33749067,33749315-33749416,
            33749744-33749827,33749902-33749992,33750105-33750178,
            33750644-33750664,33751433-33751477,33752427-33752561,
            33752693-33752752
          Length = 1376

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 90   RIHREMQQQSPRHGMLPH*FKYTLLHSLL*QY 185
            +I++  Q+Q+  +G++PH   + +  S L QY
Sbjct: 1142 KINKRRQEQAAENGIIPHLMNFVMSDSPLRQY 1173


>07_03_0235 -
           15564620-15564748,15565037-15565083,15565305-15565374,
           15566228-15566303,15567063-15567132,15567541-15567637,
           15568257-15568319
          Length = 183

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 31  IYYRKSIKSTTFLRNA*LLIESTEKCNNKVPD 126
           +++RKS+KS        L++     C N +PD
Sbjct: 111 LFFRKSVKSAVTSEQNLLIVPMLRPCCNVIPD 142


>07_01_0139 -
           1014952-1015165,1015271-1015350,1015420-1015629,
           1015925-1016044,1016650-1016709,1017129-1017204,
           1018189-1018352,1018428-1018490,1018815-1018902,
           1018997-1019647,1019965-1020449
          Length = 736

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 85  LIESTEKCNNKVPDTECCRTNSSTHYYTVY 174
           ++++    NN +PD    RT +S+H+  V+
Sbjct: 167 IVQNFPDNNNNLPDNSSKRTTTSSHHRKVF 196


>05_07_0287 + 28993615-28995617,28996464-28996524,28996603-28996830
          Length = 763

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 137 QHSVSGTLLLHFSVDSMRSHAFRK 66
           + SV+ +L  HFSV   R+  FRK
Sbjct: 201 RRSVASSLYSHFSVSKRRTEFFRK 224


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,437,074
Number of Sequences: 37544
Number of extensions: 79745
Number of successful extensions: 186
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)