Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00865X
         (399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113590-1|AAM29595.1|  705|Drosophila melanogaster RH41322p pro...    54   7e-08
AE013599-3538|AAF46952.3|  705|Drosophila melanogaster CG9882-PA...    54   7e-08
AE014297-473|AAF54117.1|  342|Drosophila melanogaster CG15185-PA...    28   5.3  
BT021227-1|AAX33375.1|  124|Drosophila melanogaster RH43429p pro...    27   9.2  

>AY113590-1|AAM29595.1|  705|Drosophila melanogaster RH41322p
           protein.
          Length = 705

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
 Frame = +1

Query: 4   ILMDYIAENKLSNVTV---IPEAGDDVLKKVTNVVGDPSFTSAILPWENVKIAYVPYKYR 174
           ++   +  N+L NV     + E  D  L  +T++  +P F +AILPW+N     +  K +
Sbjct: 462 LIESIVKHNQLKNVQFLDKVEELEDSRLAALTHIFAEPYFLNAILPWDNFYFGTLLTKIK 521

Query: 175 ETLNSGLSVIPERCEFWAVPVEFQNLQK*GCRSASAKG 288
           + L  G+ + P     +A+PVEF +L K      S +G
Sbjct: 522 DRLPEGVKISPCSARIYALPVEFLDLHKIRAPVGSCEG 559



 Score = 44.4 bits (100), Expect = 6e-05
 Identities = 22/41 (53%), Positives = 27/41 (65%)
 Frame = +3

Query: 255 KIRVPLGVCEGIDMSKFDELVETSRLISDADVEAQPLVGVP 377
           KIR P+G CEG D+  FDE+VE S   + + VEAQPL   P
Sbjct: 549 KIRAPVGSCEGFDLRLFDEMVERSAEQAVSLVEAQPLWEYP 589


>AE013599-3538|AAF46952.3|  705|Drosophila melanogaster CG9882-PA
           protein.
          Length = 705

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
 Frame = +1

Query: 4   ILMDYIAENKLSNVTV---IPEAGDDVLKKVTNVVGDPSFTSAILPWENVKIAYVPYKYR 174
           ++   +  N+L NV     + E  D  L  +T++  +P F +AILPW+N     +  K +
Sbjct: 462 LIESIVKHNQLKNVQFLDKVEELEDSRLAALTHIFAEPYFLNAILPWDNFYFGTLLTKIK 521

Query: 175 ETLNSGLSVIPERCEFWAVPVEFQNLQK*GCRSASAKG 288
           + L  G+ + P     +A+PVEF +L K      S +G
Sbjct: 522 DRLPEGVKISPCSARIYALPVEFLDLHKIRAPVGSCEG 559



 Score = 44.4 bits (100), Expect = 6e-05
 Identities = 22/41 (53%), Positives = 27/41 (65%)
 Frame = +3

Query: 255 KIRVPLGVCEGIDMSKFDELVETSRLISDADVEAQPLVGVP 377
           KIR P+G CEG D+  FDE+VE S   + + VEAQPL   P
Sbjct: 549 KIRAPVGSCEGFDLRLFDEMVERSAEQAVSLVEAQPLWEYP 589


>AE014297-473|AAF54117.1|  342|Drosophila melanogaster CG15185-PA
           protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 21/68 (30%), Positives = 35/68 (51%)
 Frame = -1

Query: 228 GPELASLRYDRQTAVQCLPILIRYIGNFHILPRQYGTGETRIAYDIGHFLQNVIAGFRYN 49
           G  +A++  DR++AV     ++ Y  N H +P+      T     +G  L NVI GF  N
Sbjct: 268 GRLVAAIVMDRKSAV-----VMAYAVN-HFVPQTMTDDSTGEV--LGIMLNNVIRGFAIN 319

Query: 48  SHVAQLIL 25
            H+ ++I+
Sbjct: 320 DHLRRIII 327


>BT021227-1|AAX33375.1|  124|Drosophila melanogaster RH43429p
           protein.
          Length = 124

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 124 WHW*N*DRLRHWSLSSKRHRRLPV*QSRCSAYSRRCNP 11
           W W    R R WS  S+R  R    + RC+   +R  P
Sbjct: 38  WRWSRWRRWRRWSRWSRRFERSCQRECRCNRRQQRRRP 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,997,457
Number of Sequences: 53049
Number of extensions: 385851
Number of successful extensions: 934
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)