Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00865X
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034364-2|CAA22252.1|  630|Caenorhabditis elegans Hypothetical ...    31   0.30 
AF077537-8|AAC26277.1|  226|Caenorhabditis elegans Hypothetical ...    28   2.8  
U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical pr...    27   3.7  
AL021175-2|CAA15966.1|  322|Caenorhabditis elegans Hypothetical ...    27   3.7  
Z92817-6|CAB60324.1|  384|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z83111-7|CAB05534.2|  384|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical p...    27   5.0  
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    27   6.5  
AL110501-9|CAB54507.2|  802|Caenorhabditis elegans Hypothetical ...    27   6.5  
AL033514-40|CAD36501.1|  802|Caenorhabditis elegans Hypothetical...    27   6.5  
AJ319870-1|CAC67459.1|  802|Caenorhabditis elegans ZYG-8 protein...    27   6.5  
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p...    26   8.7  
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>AL034364-2|CAA22252.1|  630|Caenorhabditis elegans Hypothetical
           protein W06D4.4 protein.
          Length = 630

 Score = 31.1 bits (67), Expect = 0.30
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +3

Query: 174 GDIEQRFVGHTGEMRVLGRAGGISEFTKIRVPLGVCEGIDMSKFDELVETSRLISDADVE 353
           GD E R   H G ++ +       +   I   +G   G D+S FDE+   +R  +DA V+
Sbjct: 457 GD-ELRVEPHMGVLKAIPEK--FEDLQNIASDVGTVNGFDLSFFDEISTKARTATDAIVD 513

Query: 354 AQPL 365
            Q L
Sbjct: 514 EQSL 517


>AF077537-8|AAC26277.1|  226|Caenorhabditis elegans Hypothetical
           protein F16G10.9 protein.
          Length = 226

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 289 IPSQTPSGTLIFVNSEIPPARP 224
           +P   PS T  F NSEIPP  P
Sbjct: 133 VPGNDPSLTASFDNSEIPPPTP 154


>U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical
           protein ZK1290.5 protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -2

Query: 335 YQSRSLDEFVEFGHINPFAD-AERHPYF 255
           Y    LDE +EF  I P A+  E HP+F
Sbjct: 145 YSIEDLDELLEFASILPHANQVELHPWF 172


>AL021175-2|CAA15966.1|  322|Caenorhabditis elegans Hypothetical
           protein Y6E2A.2 protein.
          Length = 322

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 109 SFTSAILPWENVKIAYVPYKYRETLNSGLSVIPERCEFWAVPVEFQN 249
           +F    L  E  K  +  YKY     S L +    C FW+ PV FQ+
Sbjct: 25  NFILLFLISEMPKKTFGSYKYLMFSFSVLGIYYSCCAFWSNPVSFQS 71


>Z92817-6|CAB60324.1|  384|Caenorhabditis elegans Hypothetical
           protein F57G8.6 protein.
          Length = 384

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +1

Query: 1   GILMDYIAENK-LSNVTVIPEAGDDVLKKVTNVVGDPSFTSAILPWENVKIAYV 159
           G+ +++   N+ L   T++P+    + +   NVVG PSF    +P E+ +  +V
Sbjct: 64  GMTIEHFQHNRDLIKSTIVPK----IPRSFANVVGRPSFVIFCVPQESYRKTFV 113


>Z83111-7|CAB05534.2|  384|Caenorhabditis elegans Hypothetical
           protein F57G8.6 protein.
          Length = 384

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +1

Query: 1   GILMDYIAENK-LSNVTVIPEAGDDVLKKVTNVVGDPSFTSAILPWENVKIAYV 159
           G+ +++   N+ L   T++P+    + +   NVVG PSF    +P E+ +  +V
Sbjct: 64  GMTIEHFQHNRDLIKSTIVPK----IPRSFANVVGRPSFVIFCVPQESYRKTFV 113


>Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 61  AGDDVLKKVTNVVGDPSFTSAILPWENVKIAYVPY 165
           AGD VL  + +  GD +FT   + WE++ ++  P+
Sbjct: 311 AGDSVLNVLVH--GDGAFTGQGVVWESIALSQAPH 343


>Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 61  AGDDVLKKVTNVVGDPSFTSAILPWENVKIAYVPY 165
           AGD VL  + +  GD +FT   + WE++ ++  P+
Sbjct: 311 AGDSVLNVLVH--GDGAFTGQGVVWESIALSQAPH 343


>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
            protein R11G1.1 protein.
          Length = 1656

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = -3

Query: 298  DISIPSQTPSGTLIFVNSEIPPARPRTRISPV*PTNRCSMSPYTYTVHRQFSHSPKAIW 122
            DIS    TP G   F+    P    RT  +   P +R S S ++ T     +HSP + W
Sbjct: 1572 DISPYRDTP-GPSSFLPPITPSRHVRTAANSPQPRHRRSDSHFSMTSLPLIAHSPTSFW 1629


>AL110501-9|CAB54507.2|  802|Caenorhabditis elegans Hypothetical
           protein Y79H2A.11 protein.
          Length = 802

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 184 SMSPYTYTVHRQFSHSPKAIWH 119
           S +P T + HR+FSH P+  +H
Sbjct: 92  SSAPSTSSAHRRFSHLPQQHFH 113


>AL033514-40|CAD36501.1|  802|Caenorhabditis elegans Hypothetical
           protein Y79H2A.11 protein.
          Length = 802

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 184 SMSPYTYTVHRQFSHSPKAIWH 119
           S +P T + HR+FSH P+  +H
Sbjct: 92  SSAPSTSSAHRRFSHLPQQHFH 113


>AJ319870-1|CAC67459.1|  802|Caenorhabditis elegans ZYG-8 protein
           protein.
          Length = 802

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 184 SMSPYTYTVHRQFSHSPKAIWH 119
           S +P T + HR+FSH P+  +H
Sbjct: 92  SSAPSTSSAHRRFSHLPQQHFH 113


>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
            protein ZK1251.9 protein.
          Length = 1701

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 274  PSGTLIFVNSEIPPARPRTRISPV*PTNRCSMS 176
            P GT I +NSE+   R    +  V   NRC +S
Sbjct: 1265 PHGTQIVINSEVYDIRTFRMLHHVPELNRCQVS 1297


>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical protein
            ZK1251.9 protein.
          Length = 1701

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 274  PSGTLIFVNSEIPPARPRTRISPV*PTNRCSMS 176
            P GT I +NSE+   R    +  V   NRC +S
Sbjct: 1265 PHGTQIVINSEVYDIRTFRMLHHVPELNRCQVS 1297


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,175,211
Number of Sequences: 27780
Number of extensions: 196183
Number of successful extensions: 529
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)