Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00865X
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   3.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   3.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   5.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   5.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   5.2  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   6.9  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -1

Query: 225 PELASLRYDRQTAVQCLPILIRYIGNFHI 139
           PEL S  YD    V    IL  Y+   H+
Sbjct: 763 PELLSGHYDSSVDVYAFGILFWYLCAGHV 791



 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 225 GRAGGISEFTKIRVPLGVCEGI 290
           G   G+S   +I++ L V EGI
Sbjct: 689 GIRAGLSWLERIQIALDVLEGI 710


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -1

Query: 225 PELASLRYDRQTAVQCLPILIRYIGNFHI 139
           PEL S  YD    V    IL  Y+   H+
Sbjct: 801 PELLSGHYDSSVDVYAFGILFWYLCAGHV 829



 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 225 GRAGGISEFTKIRVPLGVCEGI 290
           G   G+S   +I++ L V EGI
Sbjct: 727 GIRAGLSWLERIQIALDVLEGI 748


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 177 DIEQRFVGHTGEMRVLGRAGGISEFTKI 260
           D    + G+ G +R L   GG   +TK+
Sbjct: 229 DYPDIYSGYEGALRCLAHNGGEIAWTKV 256


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 177 DIEQRFVGHTGEMRVLGRAGGISEFTKI 260
           D    + G+ G +R L   GG   +TK+
Sbjct: 229 DYPDIYSGYEGALRCLAHNGGEIAWTKV 256


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 177 DIEQRFVGHTGEMRVLGRAGGISEFTKI 260
           D    + G+ G +R L   GG   +TK+
Sbjct: 229 DYPDIYSGYEGALRCLAHNGGEIAWTKV 256


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 109 SFTSAILPWENVKIAYVP 162
           +  + I  W+NV +AY P
Sbjct: 148 AIANKINSWDNVVVAYEP 165


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,051
Number of Sequences: 438
Number of extensions: 2601
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)