Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00864
         (812 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical...    32   0.56 
Z84574-6|CAE17784.1|  174|Caenorhabditis elegans Hypothetical pr...    31   0.74 
Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical pr...    31   0.74 
AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical ...    31   0.74 
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    31   0.98 
U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase prot...    30   1.7  
Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF003131-6|AAB54131.2|  166|Caenorhabditis elegans Hypothetical ...    29   4.0  
Z95310-2|CAB08563.1|  394|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z83104-6|CAB05479.1|  394|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z48621-5|CAA88543.1|  136|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z82262-4|CAE17770.1|  679|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AC006709-1|AAF60432.2|  256|Caenorhabditis elegans Hypothetical ...    28   6.9  

>AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.1 protein.
          Length = 751

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +3

Query: 555 MHDPEHRYLEQFGVIADEATTMRDPFFYRWHAYIDDVFQKHKESAYVRPYTRSELEN 725
           MH   H ++  F  +     +  DP FY  HA+ID++++K ++++     TR E EN
Sbjct: 276 MHGLSHVWVGGFMYVI--RVSPNDPTFYMHHAFIDNLWEKFRQNS----QTREEREN 326


>Z84574-6|CAE17784.1|  174|Caenorhabditis elegans Hypothetical
           protein F33E2.7 protein.
          Length = 174

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 526 TTTGTVSPRTCTTRNTDTLNNLVLSLMRPQRCAIH-SSTAGTPTSMTFSRST 678
           TTT T +P T TT  T T      +   P       ++T  TPT+ T +RST
Sbjct: 88  TTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRST 139


>Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical
           protein F21C3.2 protein.
          Length = 813

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +3

Query: 552 YMHDPEHRYLEQFGVIADEATTMRDPFFYRWHAYIDDVFQKHKESAYVR 698
           Y H   H Y+   G + + +T   DP F+  H+++D +++ +++S   R
Sbjct: 399 YTHGNPHIYVG--GDMLETSTAANDPIFWMHHSFVDLLWEMYRQSKQTR 445


>AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical
           protein ZC178.2 protein.
          Length = 1459

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 31/106 (29%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
 Frame = +1

Query: 412 TGTVRLPNGQTRPLDIDTLGNMLESSALSPNRDCTVRYTTTGTVSPRTCTTRNTDTLNNL 591
           T T+ +PN  T      T+ N   S     +   T   T+T TVS  + T   + T  N 
Sbjct: 606 TSTMTVPNDSTTAGPSSTVTNSASSETPCNSETQTSDGTSTMTVSSDSTTAGPSSTATN- 664

Query: 592 VLSLMRPQRCAIHSSTA-GTPTSMTFSRSTRNLPTCVLTLDLSSRT 726
             S      C   + T+ GT T    S ST   P+   T   SS T
Sbjct: 665 --SASSETPCNSETQTSDGTSTMTVSSDSTTAGPSSTATNSASSET 708



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
 Frame = +1

Query: 412 TGTVRLPNGQTRPLDIDTLGNMLESSALSPNRDCTVRYTTTGTVSPRTCTTRNTDTLNNL 591
           T T+ +PN  T      T+ N   S     +   T   T+T TVS  + T   + T  N 
Sbjct: 416 TSTMTVPNDSTTAGPSSTVTNSASSETPCNSETQTSDGTSTMTVSSDSTTPGPSSTATN- 474

Query: 592 VLSLMRPQRCAIHSSTA-GTPTSMTFSRSTRNLPTCVLTLDLSSRT 726
             S      C   + T+ GT T    S ST   P+  +T   SS T
Sbjct: 475 --SASSETPCNSETQTSDGTFTMTVSSDSTTAGPSSTVTNSASSET 518



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
 Frame = +1

Query: 412  TGTVRLPNGQTRPLDIDTLGNMLESSALSPNRDCTVRYTTTGTVSPRTCTTRNTDTLNNL 591
            T T+ +PN  T      T+ N   S     +   T   T T TVS  + T   + T+ N 
Sbjct: 1130 TSTMTVPNDSTTAGPSSTVTNSASSETPCNSETQTSDGTFTMTVSSDSTTAGPSSTVTN- 1188

Query: 592  VLSLMRPQRCAIHSSTA-GTPTSMTFSRSTRNLPTCVLTLDLSSRT 726
              S      C   + T+ GT T    S ST   P+  +T   SS T
Sbjct: 1189 --SASSETPCNSETQTSDGTFTMTVSSDSTTAGPSSTVTNSASSET 1232



 Score = 29.1 bits (62), Expect = 4.0
 Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
 Frame = +1

Query: 412  TGTVRLPNGQTRPLDIDTLGNMLESSALSPNRDCTVRYTTTGTVSPRTCTTRNTDTLNNL 591
            T T+ +PN  T      T+ N   S     +   T   T+T TVS  + T   + T+ N 
Sbjct: 1244 TSTMTVPNDSTTAGPSSTVTNSASSETPCNSETQTSDGTSTMTVSSDSTTAGPSSTVTN- 1302

Query: 592  VLSLMRPQRCAIHSSTA-GTPTSMTFSRSTRNLPTCVLTLDLSSRT 726
              S      C   + T+ GT T    S ST    +   T   SS T
Sbjct: 1303 --SASSETPCNSETQTSDGTSTMTVSSDSTTAGQSSTATNSASSET 1346


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
 Frame = +1

Query: 484 SSALSPN---RDCTVRYT----TTGTVSPRTCTTRNTDTLNNLVLSLMRPQRCAIHSSTA 642
           +S +SP     DCT   T    TT T +P T TT  T                   + T 
Sbjct: 50  TSIISPKWVKADCTTTSTTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETT 109

Query: 643 GTPTSMTFSRSTRNLPTCVLTLDLSSRT 726
            TPT+ T +  T   PT   T   ++ T
Sbjct: 110 TTPTTETTTTPTTTTPTTTTTTPTTTTT 137



 Score = 29.1 bits (62), Expect = 4.0
 Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 2/107 (1%)
 Frame = +1

Query: 412 TGTVRLPNGQTRPLDIDTLGNMLESSALSPNRDCTVRYTTTGTVSPRTCTTRNTDTLNNL 591
           T T   P   T      T       +  +P    T   TTT T +  T TT  T+T    
Sbjct: 96  TTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTT-TETTTTPTTTTTETTTTP 154

Query: 592 VLSLMRP-QRCAIHSSTAGTPTSMTFS-RSTRNLPTCVLTLDLSSRT 726
             +   P       ++T  TPT+ T +  +T   PT   T   ++ T
Sbjct: 155 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTT 201



 Score = 27.9 bits (59), Expect = 9.1
 Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 1/96 (1%)
 Frame = +1

Query: 442 TRPLDIDTLGNMLESSALSPNRDCTVR-YTTTGTVSPRTCTTRNTDTLNNLVLSLMRPQR 618
           T P    T       +  +P  + T    TTT T +  T TT  T+T      +      
Sbjct: 93  TTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTT 152

Query: 619 CAIHSSTAGTPTSMTFSRSTRNLPTCVLTLDLSSRT 726
               ++T  T T+ T   +T   PT   T   ++ T
Sbjct: 153 TPTTTTTTPTTTTTT-PTTTTTTPTTTTTTPTTTTT 187


>U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase protein
           4 protein.
          Length = 751

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +3

Query: 552 YMHDPEHRYLEQFGVIADEATTMRDPFFYRWHAYIDDVFQK 674
           Y H   H ++   G + D AT+  DP F+  HA+ID V+++
Sbjct: 280 YTHGNVHIFVG--GDMFDTATSSNDPSFFLHHAFIDFVWEE 318


>Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical
           protein F35E2.5 protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
 Frame = +1

Query: 460 DTLGNMLESSALSPNRDCTVRYTTTGTVSPRTCTTRNTDTLNNLVLSLMRPQ----RCAI 627
           D +G   +++   P R    R TTT T + R  TT+ T       L ++ P+    +   
Sbjct: 273 DLIGVCAKNTVTKPPR----RTTTTRTTTKRLTTTKATLKTTTKTLPVIPPRPNVTKPIT 328

Query: 628 HSSTAGTPTSMTFSRSTRNLPTCVLT 705
            S+T  T T  T  R T    T VLT
Sbjct: 329 RSTTKRTTTRSTTKRLTTTKATTVLT 354


>AF003131-6|AAB54131.2|  166|Caenorhabditis elegans Hypothetical
           protein C09D1.2 protein.
          Length = 166

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 10/54 (18%), Positives = 27/54 (50%)
 Frame = +3

Query: 39  WREDIGINLHHYHWHLVYPFTANDLSIVAKDRRGELFFYMHQQVIARFNCERLC 200
           W    G   ++ +W    PF    L+++  ++RG+   +   ++++++N   +C
Sbjct: 109 WHWMDGSEFNYMNWDRGMPFGRRALAVLVMNKRGKWINHYADKILSQYNAVAVC 162


>Z95310-2|CAB08563.1|  394|Caenorhabditis elegans Hypothetical
           protein F09B12.5 protein.
          Length = 394

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
 Frame = +1

Query: 493 LSPNRDCTVRYTTTGTVSPRTCTTRNTDTL---NNLVLSLMRPQRCAIHSSTAGTPTSMT 663
           L PN+ C  ++   G    + CT  N  T    N+L  + +      +  ST  T T+  
Sbjct: 162 LKPNKICDGKFDCDGGDDEKNCTKSNATTTTISNSLSTTTVVKSTTTLPISTTTTTTTTI 221

Query: 664 FSRSTRNLPTCVLTLDLSSRTRA 732
             + T    T   T  +++  RA
Sbjct: 222 TPKHTNLTTTATTTKKVTTTERA 244


>Z83104-6|CAB05479.1|  394|Caenorhabditis elegans Hypothetical
           protein F09B12.5 protein.
          Length = 394

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
 Frame = +1

Query: 493 LSPNRDCTVRYTTTGTVSPRTCTTRNTDTL---NNLVLSLMRPQRCAIHSSTAGTPTSMT 663
           L PN+ C  ++   G    + CT  N  T    N+L  + +      +  ST  T T+  
Sbjct: 162 LKPNKICDGKFDCDGGDDEKNCTKSNATTTTISNSLSTTTVVKSTTTLPISTTTTTTTTI 221

Query: 664 FSRSTRNLPTCVLTLDLSSRTRA 732
             + T    T   T  +++  RA
Sbjct: 222 TPKHTNLTTTATTTKKVTTTERA 244


>Z48621-5|CAA88543.1|  136|Caenorhabditis elegans Hypothetical
           protein R07B1.6 protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 526 TTTGTVSPRTCTTRNTDTL 582
           TTT T++P TCTT  TD +
Sbjct: 27  TTTTTIAPTTCTTCTTDLI 45


>Z82262-4|CAE17770.1|  679|Caenorhabditis elegans Hypothetical
           protein C43F9.9 protein.
          Length = 679

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
 Frame = -2

Query: 505 CSARGRWTP-TCCRAYRCQEAESARLAI*RYQSR*LLQRFFSSVPFRQWSQIDFGRTIQV 329
           CS +G+    +C R     E +SAR  I +Y    L   F    P+  ++  D      +
Sbjct: 502 CSTKGKLVDASCLRIIFSLERDSARFVIEKYVPSTLAMMFAWVAPYVPYNYEDVRIITPI 561

Query: 328 LPLHTGLTRRPSARRSQTVKLREVSSGIGSLQLLNFLTLFNELHKRSQLKRA 173
             L T +      +  +T  L  +     +++    L+L   L   + +KR+
Sbjct: 562 TVLLTLVQMEKGDKEIRTSYLTSIDVWFAAMKSFTVLSLLESLAVLALIKRS 613


>AC006709-1|AAF60432.2|  256|Caenorhabditis elegans Hypothetical
           protein Y119C1A.1 protein.
          Length = 256

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = -3

Query: 783 SVFGCPPASPPTRTSLARPGSRAQIECKDARRQIPCASGKRHRCRRASGRRMDRASL 613
           S  G PP  PP   S+++  S     C    R+    S + H C+  S RR D + +
Sbjct: 186 SAKGVPPPRPPPPRSISQENSTGPWICDRCSRENNSNSYRCHHCQLPS-RRFDPSEI 241


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,478,714
Number of Sequences: 27780
Number of extensions: 424782
Number of successful extensions: 1593
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)