Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00863
         (794 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    26   0.40 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.92 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    25   0.92 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   1.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.6  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +1

Query: 589 PCFKAIKPEELTTCGWTKLNKL-TVAPNVVAFTKRFNR 699
           P  K + P+E  T  WT++N    V+P+   F     R
Sbjct: 46  PTSKLVPPDERITYSWTEINAFANVSPSKTKFFNLIKR 83


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 91  VQLLWFVFTRNRILRVHYC*WKC-YCYLKWQLLTKEKTSILLGSVGYVRRLK 243
           V LLW  F  N +L  +   W+C Y ++    L+K    +L+    +V  LK
Sbjct: 141 VILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQVMLIQFCAFVVVLK 192


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +1

Query: 589 PCFKAIKPEELTTCGWTKLNKL-TVAPNVVAFTKRFNR 699
           P  K + P+E  T  WT++N    V+P    F     R
Sbjct: 46  PTSKLVPPDERITYSWTEINAFANVSPPKTKFFNLIKR 83


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
 Frame = -2

Query: 508 IN*TSSW*TVCFVMKNGIMLTVAAIFTMSIIVIASTVIFSEALLTIERDSGLLLVINLAW 329
           +N    W TVC V  N     +A  +   ++   + V +   L+  ER   + L+I    
Sbjct: 13  LNGLIDWYTVCLVPLNPYQFFLAVQYPRIVVSTFNIVFYMYTLILEERFKLINLIIKQEE 72

Query: 328 FV---LKRPIL 305
           F    +KR +L
Sbjct: 73  FFSPKIKRMVL 83


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 321 RTNHARLITRSSPLSLSIVNKASLKMTVLAITI 419
           R  +   +TRSS   L      +LKMT++ + +
Sbjct: 251 RNPYGDSVTRSSLAFLGKAKVRTLKMTIIIVLV 283


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 321 RTNHARLITRSSPLSLSIVNKASLKMTVLAITI 419
           R  +   +TRSS   L      +LKMT++ + +
Sbjct: 251 RNPYGDSVTRSSLAFLGKAKVRTLKMTIIIVLV 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,272
Number of Sequences: 336
Number of extensions: 3738
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)