Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00863
         (794 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1658 - 35119623-35119754,35121033-35121121,35121205-351215...    34   0.15 
08_01_0200 + 1632883-1633913,1634620-1634677                           29   5.6  
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019...    29   5.6  
08_02_0707 - 20212190-20214592                                         28   9.8  

>04_04_1658 -
           35119623-35119754,35121033-35121121,35121205-35121599,
           35122009-35122091,35122163-35124184,35124859-35124927,
           35125050-35125130,35125215-35125308,35125435-35125499,
           35125961-35126038,35126115-35126360
          Length = 1117

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
 Frame = +1

Query: 544 LSPDDVGNQLTLLDLPCFKAIKPEELT--TCGWTKLNKLTVAPNVVAFTKRFNRVSFWTV 717
           LS  D    L + D    + ++P E T   CG      L +AP V+ F K    V  W++
Sbjct: 112 LSSPDSNAILKISDFGLSRVLRPGEYTDTNCGTC----LYMAPEVMLFQKYDGGVDLWSI 167

Query: 718 Q----EILNGQSPKRGR 756
                E+LNG  P RGR
Sbjct: 168 AAILFELLNGYPPFRGR 184


>08_01_0200 + 1632883-1633913,1634620-1634677
          Length = 362

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 395 DDCACYYNYGHGENGSNRQHDSI 463
           D C C+Y  G G  G +R+H S+
Sbjct: 38  DWCICFYPEGQGGGGGDREHVSV 60


>02_03_0314 -
           17600970-17600974,17601230-17601357,17601832-17601924,
           17602145-17602257,17602520-17602627,17602724-17602828,
           17603185-17603355,17603474-17603652,17603741-17603969,
           17604841-17604955,17605137-17605312,17606060-17606143,
           17606463-17606630,17607011-17607097,17607201-17607323
          Length = 627

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +2

Query: 254 LLSDSLAVLR--IVEHEDEENWPLED 325
           L+  S A+L   I  H+DE NWPL+D
Sbjct: 172 LMGVSKAILENVIFVHQDESNWPLQD 197


>08_02_0707 - 20212190-20214592
          Length = 800

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 473 CNEKWNHVDGCCHFHHVHNCNSKH 402
           C E  +H  G  H HH H+ +S+H
Sbjct: 573 CKENHSHCHGHDHHHHHHHDHSEH 596


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,161,693
Number of Sequences: 37544
Number of extensions: 371449
Number of successful extensions: 837
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)