Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00863
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 51 8e-07
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 51 8e-07
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 37 0.014
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 37 0.014
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 37 0.014
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 37 0.014
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 37 0.014
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 37 0.014
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 37 0.014
AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical ... 36 0.033
AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical ... 36 0.033
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 33 0.24
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 33 0.24
U41546-5|AAC48222.2| 1022|Caenorhabditis elegans Sodium:neurotra... 31 1.3
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL110479-17|CAB54363.3| 177|Caenorhabditis elegans Hypothetical... 28 8.9
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +1
Query: 538 LRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTV 717
L L P ++G QLTLL ++AI+P EL WTK K +P ++ T +++W
Sbjct: 894 LTLHPIEIGRQLTLLHSDLYRAIQPIELVEAAWTKAEKWRKSPQLLRLTDHSTLLTYWVS 953
Query: 718 QEILNGQS 741
+ I+ +S
Sbjct: 954 RSIVETES 961
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +1
Query: 538 LRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTV 717
L L P ++G QLTLL ++AI+P EL WTK K +P ++ T +++W
Sbjct: 894 LTLHPIEIGRQLTLLHSDLYRAIQPIELVEAAWTKAEKWRKSPQLLRLTDHSTLLTYWVS 953
Query: 718 QEILNGQS 741
+ I+ +S
Sbjct: 954 RSIVETES 961
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +1
Query: 538 LRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTV 717
L L+ V QLTL D F AI+P E KL+ +P + F + FNR +W
Sbjct: 891 LSLNAQVVAAQLTLQDFSVFSAIEPTEFLD-NLFKLDSKYGSPKLEEFEQLFNREMWWVA 949
Query: 718 QEI 726
EI
Sbjct: 950 TEI 952
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +1
Query: 538 LRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTV 717
L L+ V QLTL D F AI+P E KL+ +P + F + FNR +W
Sbjct: 891 LSLNAQVVAAQLTLQDFSVFSAIEPTEFLD-NLFKLDSKYGSPKLEEFEQLFNREMWWVA 949
Query: 718 QEI 726
EI
Sbjct: 950 TEI 952
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +1
Query: 538 LRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTV 717
L L+ V QLTL D F AI+P E KL+ +P + F + FNR +W
Sbjct: 891 LSLNAQVVAAQLTLQDFSVFSAIEPTEFLD-NLFKLDSKYGSPKLEEFEQLFNREMWWVA 949
Query: 718 QEI 726
EI
Sbjct: 950 TEI 952
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +1
Query: 538 LRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTV 717
L L+ V QLTL D F AI+P E KL+ +P + F + FNR +W
Sbjct: 891 LSLNAQVVAAQLTLQDFSVFSAIEPTEFLD-NLFKLDSKYGSPKLEEFEQLFNREMWWVA 949
Query: 718 QEI 726
EI
Sbjct: 950 TEI 952
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +1
Query: 538 LRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTV 717
L L+ V QLTL D F AI+P E KL+ +P + F + FNR +W
Sbjct: 768 LSLNAQVVAAQLTLQDFSVFSAIEPTEFLD-NLFKLDSKYGSPKLEEFEQLFNREMWWVA 826
Query: 718 QEI 726
EI
Sbjct: 827 TEI 829
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +1
Query: 538 LRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTV 717
L L+ V QLTL D F AI+P E KL+ +P + F + FNR +W
Sbjct: 891 LSLNAQVVAAQLTLQDFSVFSAIEPTEFLD-NLFKLDSKYGSPKLEEFEQLFNREMWWVA 949
Query: 718 QEI 726
EI
Sbjct: 950 TEI 952
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +1
Query: 538 LRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTV 717
L L+ V QLTL D F AI+P E KL+ +P + F + FNR +W
Sbjct: 891 LSLNAQVVAAQLTLQDFSVFSAIEPTEFLD-NLFKLDSKYGSPKLEEFEQLFNREMWWVA 949
Query: 718 QEI 726
EI
Sbjct: 950 TEI 952
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +1
Query: 538 LRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTV 717
L L+ V QLTL D F AI+P E KL+ +P + F + FNR +W
Sbjct: 891 LSLNAQVVAAQLTLQDFSVFSAIEPTEFLD-NLFKLDSKYGSPKLEEFEQLFNREMWWVA 949
Query: 718 QEI 726
EI
Sbjct: 950 TEI 952
>AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical
protein Y34B4A.4b protein.
Length = 833
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +1
Query: 556 DVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTVQEILNG 735
++ QLT +D + I+ EL W + + N+V FT++FN +SFW V+ ++
Sbjct: 640 EIACQLTFIDSQLYHRIESAELLW--WAQEQNEKKSKNLVNFTEQFNNLSFW-VRTLIIT 696
Query: 736 QSPKRGRK 759
Q ++ R+
Sbjct: 697 QGTQKERE 704
>AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical
protein Y34B4A.4a protein.
Length = 877
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +1
Query: 556 DVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTVQEILNG 735
++ QLT +D + I+ EL W + + N+V FT++FN +SFW V+ ++
Sbjct: 640 EIACQLTFIDSQLYHRIESAELLW--WAQEQNEKKSKNLVNFTEQFNNLSFW-VRTLIIT 696
Query: 736 QSPKRGRK 759
Q ++ R+
Sbjct: 697 QGTQKERE 704
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 269 LAVLRIVEHEDEENWPLEDKPCKINHKKQSTIPLNSQQSFTK 394
LA + ED++ PLE K CK N+K++S IP + F K
Sbjct: 1096 LACFELYSEEDKDLIPLEPK-CKHNYKERSEIPTEFRPQFDK 1136
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 269 LAVLRIVEHEDEENWPLEDKPCKINHKKQSTIPLNSQQSFTK 394
LA + ED++ PLE K CK N+K++S IP + F K
Sbjct: 1096 LACFELYSEEDKDLIPLEPK-CKHNYKERSEIPTEFRPQFDK 1136
>U41546-5|AAC48222.2| 1022|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 12
protein.
Length = 1022
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -1
Query: 473 CNEKWNHVDGCCHFHHVHNC-NSKHS 399
C ++W + CC+ H++H+C NS +S
Sbjct: 283 CRDEWQLDNRCCNLHNLHSCFNSTNS 308
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +1
Query: 532 SALRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFW 711
S ++ SP D+ L+ +D I EL + K L P + FN +S W
Sbjct: 149 SFVQASPSDISTSLSHIDYRVLSRISITELKQ--YVKDGHLRSCPMLERSISVFNNLSNW 206
Query: 712 TVQEILNGQSPK 747
ILN +PK
Sbjct: 207 VQCMILNKTTPK 218
>Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical
protein ZK550.5 protein.
Length = 328
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 607 KPEELTTCGWTKLNKL 654
+PEELT C WT + K+
Sbjct: 167 RPEELTVCAWTAMEKI 182
>Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical
protein B0001.2 protein.
Length = 926
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +2
Query: 380 QSFTKDDCACYYNYGHGENGSNRQHDSIFHYKTN 481
+ +++ C+ N G GE N+ D +F + N
Sbjct: 833 EDLVREESVCFVNIGRGEKMENQDIDEVFKIEKN 866
>AL110479-17|CAB54363.3| 177|Caenorhabditis elegans Hypothetical
protein Y105C5B.18 protein.
Length = 177
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -3
Query: 726 YLLYGPKADPIESLRKCHHIRCHSQFVQFGPATCCQFFRLDSFKT 592
++ Y DP+++ CHH+ C S + C F + F +
Sbjct: 99 WVYYAQHIDPLQTSAACHHLTCKSGSSNNNSVSGCIFGPVRKFSS 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,152,098
Number of Sequences: 27780
Number of extensions: 347662
Number of successful extensions: 881
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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