Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00862
         (544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    29   0.035
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.99 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.0  
AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.       21   5.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.0  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 28.7 bits (61), Expect = 0.035
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = +3

Query: 261 FKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKDSVKQKRWNKRKLTLA 434
           F  QFSK IKLG+  D+      K  E +R   S    E    KD V + + N++ +   
Sbjct: 426 FYEQFSKNIKLGIHEDSQNR--AKLSELLRYHTSASGDEACSLKDYVSRIKPNQKHIYYI 483

Query: 435 ERKNRIKQKKASFIKRLQ 488
             +++ +   +SF++R++
Sbjct: 484 TGESKEQVANSSFVERVK 501


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 48  CRLSTHHYWCSCLWSYEG 101
           C+  T HY C C + Y G
Sbjct: 76  CQDHTTHYTCHCPYGYTG 93


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 262 KESHHPVQDFSCIQQHANQRCE 197
           K+SH P   + CI    NQRCE
Sbjct: 49  KKSHPPQWTWQCI----NQRCE 66


>AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.
          Length = 38

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 371 ERVKERLGQTEALEQTQANIGREEKQ 448
           +R+ E + QTE++E  +  IGR  ++
Sbjct: 11  KRLFEHMLQTESIEPVKMAIGRPSEK 36


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 122 LRPPSTAPFIAPKT 81
           L PP++ P ++PK+
Sbjct: 106 LTPPNSEPLVSPKS 119


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 87  WSYEGCC*RWPQCSSFHQKIPWL*CRIQ 170
           WS       W  CSSF Q+     C I+
Sbjct: 403 WSVNAGMWMWLSCSSFFQQFFHCYCPIK 430


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,183
Number of Sequences: 336
Number of extensions: 2467
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)