Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00862
(544 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679... 106 1e-23
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626... 106 1e-23
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 31 0.79
11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415 30 1.4
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768... 30 1.4
01_06_0837 - 32328191-32328369,32328682-32328731,32328844-323289... 29 1.8
02_01_0475 + 3422629-3422695,3422960-3423216 29 2.4
02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,444... 29 3.2
05_04_0084 - 17788077-17789240 28 5.5
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 28 5.5
11_03_0044 - 9198016-9199143,9199579-9199674,9199771-9199846,920... 27 7.3
06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089 27 7.3
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 27 7.3
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119 27 9.7
04_04_1528 + 34172149-34172233,34172335-34172414,34172621-341726... 27 9.7
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521... 27 9.7
01_06_1261 - 35826513-35828941,35829201-35829294 27 9.7
01_05_0808 - 25414486-25414677,25415114-25415290,25415839-254159... 27 9.7
01_05_0553 + 23185473-23186188,23187096-23187101,23187230-231873... 27 9.7
>01_06_1660 +
38966999-38967001,38967685-38967757,38967841-38967923,
38968042-38968168,38968260-38968339,38968428-38968544,
38968711-38968845,38969046-38969215,38969300-38969417
Length = 301
Score = 106 bits (254), Expect = 1e-23
Identities = 47/84 (55%), Positives = 65/84 (77%)
Frame = +1
Query: 1 VEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFN 180
VEP D FR LDVGL RTTTG RVFGA+KGA+DGGL++PHS KRF G+ + K+ +
Sbjct: 130 VEPADERR-PFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLD 188
Query: 181 AEVHRAHIFGLHVAEYMRSLEQDD 252
+++HR +I+G HVA+YMRS+ +++
Sbjct: 189 SDIHRKYIYGGHVADYMRSMAEEE 212
Score = 69.7 bits (163), Expect = 1e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +3
Query: 255 DSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLA 434
+ F+ FS+Y+K G+ AD +EA+YKK H AIRADP+ K KK+ KR+N +KLT
Sbjct: 214 EKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPT-MAKSTKKEPATHKRYNLKKLT-- 270
Query: 435 ERKNRIKQKKASFIKRLQA 491
+Q+KAS ++RL A
Sbjct: 271 -----YEQRKASLVERLNA 284
>01_06_1659 +
38961637-38961639,38962361-38962433,38962531-38962613,
38962732-38962858,38962950-38963029,38963112-38963228,
38963393-38963527,38963714-38963883,38963970-38964087
Length = 301
Score = 106 bits (254), Expect = 1e-23
Identities = 47/84 (55%), Positives = 65/84 (77%)
Frame = +1
Query: 1 VEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFN 180
VEP D FR LDVGL RTTTG RVFGA+KGA+DGGL++PHS KRF G+ + K+ +
Sbjct: 130 VEPADERR-PFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLD 188
Query: 181 AEVHRAHIFGLHVAEYMRSLEQDD 252
+++HR +I+G HVA+YMRS+ +++
Sbjct: 189 SDIHRKYIYGGHVADYMRSMAEEE 212
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/79 (44%), Positives = 51/79 (64%)
Frame = +3
Query: 255 DSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLA 434
+ F+ FS+Y+K G+ AD +E++YKK H AIRADP+ K KK+ KR+N +KLT
Sbjct: 214 EKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPT-MAKSTKKEPATHKRYNLKKLT-- 270
Query: 435 ERKNRIKQKKASFIKRLQA 491
+Q+KAS ++RL A
Sbjct: 271 -----YEQRKASLVERLNA 284
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 30.7 bits (66), Expect = 0.79
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 366 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 464
KKK+ KK K+K+ NK+K ++K + K+KK
Sbjct: 74 KKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKK 106
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 321 IYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFI 476
+ KK + + KKK+ KK + K+K+ K+K ++K R KA I
Sbjct: 66 VMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRWPSNKAQHI 117
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 366 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 482
KKK+ KK K+K+ K+K ++K + K+KK KR
Sbjct: 70 KKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108
>11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415
Length = 126
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 312 IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 464
+E KKA ++ P KKK+ KK K+K+ K+K E ++ ++Q+K
Sbjct: 40 LELRKKKAKAKVKKKP--KKKKNKKAKKKKKKKKKKKKEEEEEESDVRQQK 88
>10_04_0022 +
7687383-7687670,7688479-7688556,7689456-7689535,
7689876-7690095,7690444-7690677
Length = 299
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/92 (21%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Frame = +3
Query: 255 DSFKRQFSKYIKLGVTA--DAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW---NKR 419
+ K + + ++ G+ D ++A +K E + HK ++ +++ + R N+R
Sbjct: 182 EDIKNEIKRRVEEGIKQLFDEVDAQLQKEKETALREARHKAEQERREREELDRMLEENRR 241
Query: 420 KLTLAERKNRIKQKKASF-----IKRLQAQAE 500
K+ A+RK ++Q++ ++R+Q Q E
Sbjct: 242 KVEEAQRKEALEQQQKELERFLELERIQKQRE 273
>01_06_0837 -
32328191-32328369,32328682-32328731,32328844-32328923,
32329193-32329345,32329505-32329654,32329877-32330000,
32330086-32330198,32330287-32330420,32330566-32331232
Length = 549
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -1
Query: 379 NSFFLWDGSARMASWAFL*MASIASAVTPSFMYLLNCLLKESHHPVQDFSCIQQH 215
NS +W+ + R A+ A+++S + P ++ L C L P+ F+C QH
Sbjct: 109 NSGLVWEAATRFAALVVFAEANLSSHLAPVSVFFLGCAL-IVRDPI-PFTCSLQH 161
>02_01_0475 + 3422629-3422695,3422960-3423216
Length = 107
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +3
Query: 288 KLGVTADA----IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIK 455
+LG DA ++ + + A+ + KKK+ KK K+K+ K+K ++K + K
Sbjct: 14 RLGTDLDAYGFRVQVVLQLAYTIFGFEEGKKKKKKKKKKKKKKK--KKKKKKKKKKKKKK 71
Query: 456 QKKASFIKRLQA 491
K +S + L A
Sbjct: 72 NKLSSAVTNLGA 83
>02_01_0598 +
4440018-4440070,4440627-4440693,4440794-4440926,
4441075-4441120,4442470-4442521,4442601-4442753,
4443338-4443457,4443549-4443714,4443822-4443934,
4444049-4444120,4444992-4445213,4445270-4445317,
4445639-4445697,4445809-4445887,4445982-4446119,
4446327-4446551,4446643-4447430,4447548-4447723,
4447911-4448169,4448646-4448707,4451055-4451212,
4451618-4451743,4452197-4452260,4452386-4452494,
4452607-4452760,4453055-4453178,4453257-4453333,
4453442-4453494,4453673-4453727,4453833-4454021
Length = 1379
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 291 LGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNK 416
LG++ A+EA YK+++E+ A+P KK + +W++
Sbjct: 748 LGLSHYAMEAGYKRSNESTPAEPVPSKKPKVDPVLPASKWSR 789
>05_04_0084 - 17788077-17789240
Length = 387
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 327 KKAHEAIRADPSHKKKELKKDSVKQKR----WNKRKLTLAERKNRIKQKKASFIK 479
+ A E + DP K+ +KKD +Q++ W +R+ + ++K + K+ I+
Sbjct: 300 RAAGEKVHDDPKLIKESMKKDKKRQQKHAEQWKERQKMVDKQKKERQSKRTENIR 354
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 359 IPQEERVKERLGQTEALEQTQANIGREEKQNQAKE 463
+P E+ V ER + E LE + I EEK+ + +E
Sbjct: 518 LPSEDSVSERRRKLEFLEMQEELIKEEEKKKEKEE 552
>11_03_0044 -
9198016-9199143,9199579-9199674,9199771-9199846,
9200330-9200547,9200703-9200918,9201336-9201521,
9201607-9201708,9201828-9202495,9203248-9203314
Length = 918
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 137 SKDSLAMMQNPKSSMLKYTGLTSLVCMLLNT*EVLNRMMRFFQETIQQVHKTRSH 301
S ++M Q+ + + Y GL+++ L T + +R R FQ+T + + + RSH
Sbjct: 61 SPSMVSMSQSQRIKIPSYVGLSTVHTPALLTPVISSRSTRTFQKTAKTIQE-RSH 114
>06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089
Length = 681
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 402 KRWNKRKLTLAERKNRIKQKK 464
+RW K KL+ +ERK R ++ K
Sbjct: 229 ERWKKEKLSKSERKRRAREAK 249
>02_05_0366 -
28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 384 KDSVKQKRWNKRKLTLAERKNRIKQKKASFI 476
KD KQK + K +L L ERK + K+ F+
Sbjct: 142 KDERKQKVFYKNQLELEERKKKALDKQLDFL 172
>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
Length = 440
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 348 RADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFI 476
R +PS K KK K+K+ K+K ++K + K+KK F+
Sbjct: 363 RLNPSKTIKRKKKKKKKKKK--KKKKKKKKKKKKKKKKKLRFV 403
>04_04_1528 +
34172149-34172233,34172335-34172414,34172621-34172689,
34172780-34172837,34173296-34173357,34173441-34173554,
34173862-34173964,34174085-34174134,34174335-34174724,
34174918-34175244,34175360-34175689
Length = 555
Score = 27.1 bits (57), Expect = 9.7
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 79 RVFGAMKGAVDGGLNVPHSIKRFPGYDA-ESKKFNAEVHRAHIFGLHVAEYMRSLEQDDE 255
RV+GA+ ++ LN P ++ + GYD + F A I L V + +L D+
Sbjct: 340 RVYGALLWSLGKVLNTPEVMRVYIGYDVIFPRSFTFTYGNASI-NLMVLQRSHNLTTDNS 398
Query: 256 ILSRDNS 276
L+ D+S
Sbjct: 399 KLTCDSS 405
>04_01_0399 -
5214183-5214206,5215437-5215502,5219537-5219635,
5219746-5219817,5219918-5220491,5220575-5220687,
5220842-5220941,5221059-5221181,5221268-5221335,
5221461-5221610,5221715-5221858,5222097-5222288,
5222710-5222794,5222892-5223043,5223138-5223296,
5223552-5223605,5223698-5223836,5223955-5224088,
5224200-5225117
Length = 1121
Score = 27.1 bits (57), Expect = 9.7
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -1
Query: 427 VSLRLFQRFCLTESFFNSFFLWDGSARMASWAFL*MASIASAVTPSFMYLLNCLLK 260
V LRL Q L SF+ ++ S +SW L A++ + P +Y L LLK
Sbjct: 338 VELRLMQEILLYVSFYIHRSVFTASGNNSSWDLLAPANVDYSTNP--LYRLFRLLK 391
>01_06_1261 - 35826513-35828941,35829201-35829294
Length = 840
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 359 IPQEERVKERLGQTEALEQTQANIGREEKQNQAKEGFLHQETAGSGGSLN 508
I ++ ERL Q E + QT IG K ++ G +HQ+ SLN
Sbjct: 377 IEDSSKLSERLKQVEEVLQTIQRIG---KSVHSENGNIHQQLTEVDDSLN 423
>01_05_0808 - 25414486-25414677,25415114-25415290,25415839-25415928,
25416016-25416081,25416170-25416240,25416375-25416450,
25416567-25420098,25421464-25421834
Length = 1524
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 163 ESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEILSRDN 273
E+++ NA V ++ HV+ Y S+E D+I +N
Sbjct: 890 EAEEANAFVEGINVMETHVSTYGTSVEDSDQIQDSEN 926
>01_05_0553 + 23185473-23186188,23187096-23187101,23187230-23187374,
23187887-23188159,23188275-23188338,23188479-23188744,
23188951-23189045,23189544-23189718,23190669-23191063,
23191830-23191953,23192864-23192959,23193049-23193120,
23194687-23194824,23195369-23195549,23195602-23195963,
23196944-23197386,23197461-23197763,23197857-23198081,
23198260-23198350,23198702-23198779,23198939-23199229,
23199316-23199513,23199681-23200163,23200488-23200562,
23201163-23201324,23201400-23201729,23201816-23201916,
23202477-23202581,23202931-23203162,23203913-23204257,
23204346-23204447,23206010-23206153,23206463-23206551,
23206979-23207061,23207172-23207287,23207824-23207909,
23208461-23208560,23209270-23209335
Length = 2451
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 289 FMYLLNCLLKESHHPVQDFSCIQQHANQRCEPCVLQH 179
F YL N L+ + H CIQ + N + L+H
Sbjct: 2183 FNYLYNFLVLKGDHVASGLCCIQLYVNSMSQEEALKH 2219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,340,259
Number of Sequences: 37544
Number of extensions: 276651
Number of successful extensions: 1024
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -