Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00862
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   163   3e-42
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    27   0.30 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   2.1  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    24   2.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   3.7  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   6.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  163 bits (397), Expect = 3e-42
 Identities = 89/174 (51%), Positives = 104/174 (59%), Gaps = 14/174 (8%)
 Frame = +1

Query: 1   VEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFN 180
           VEPVD GP AFRCYLDVGLARTTTG+RVFGAMKGAVDGGLN+PHS+KRFPGY AE+K FN
Sbjct: 132 VEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFN 191

Query: 181 AEVHRAHIFGLHVAEYMRSLEQDDE--------------ILSRDNSAST*N*ESLQMLLK 318
           AE+HR HIFGLHVA YMR+LE++DE              I + D      N  +    + 
Sbjct: 192 AEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLGIKADDIENIYKNAHASIRKIP 251

Query: 319 PSTRKPMKPSVRIHPXXXXXXXXXXXXXXAGTNAS*HWPRGKTESSKRRLPSSR 480
           PS R P + S R                   T  +  WPR +  S  +RLP  R
Sbjct: 252 PSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPT-SWPRSRPTSKPKRLPRRR 304



 Score = 58.8 bits (136), Expect = 1e-10
 Identities = 28/65 (43%), Positives = 39/65 (60%)
 Frame = +3

Query: 255 DSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLA 434
           ++FKRQFSKYI LG+ AD IE IYK AH +IR  P  ++   ++      RW   +   A
Sbjct: 217 EAFKRQFSKYISLGIKADDIENIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPA 276

Query: 435 ERKNR 449
            R++R
Sbjct: 277 RRRSR 281


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 0.30
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 315 EAIYKKAHEAIRADPSHKKKE 377
           +++Y+K  + +R DP+HK  E
Sbjct: 238 DSVYRKVRDTVRDDPAHKNLE 258


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 315 EAIYKKAHEAIRADPSHK 368
           E +Y+   +AI+ DP+HK
Sbjct: 212 ETVYQMVKDAIKFDPAHK 229


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +1

Query: 109 DGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEILSR 267
           DGGL+         G+D  S     ++    + G H   Y+ S    DE+ +R
Sbjct: 153 DGGLSAS-KYSYIGGFDGTSNVLAGKLFNIPVKGTHAHAYITSFTGIDELKTR 204


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 115 HRQQHPS*LQRHEH 74
           H+QQHP   Q H H
Sbjct: 173 HQQQHPGHSQHHHH 186


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 324 YKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASF--IKRLQAQA 497
           + K    +RA    +KK L++ + ++KR  + +    + K  I++ +A    + R + + 
Sbjct: 385 FAKVQANMRATNERRKKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQKTEV 444

Query: 498 EA 503
           EA
Sbjct: 445 EA 446


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,221
Number of Sequences: 2352
Number of extensions: 10550
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)