Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00860
(472 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 124 1e-27
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 101 1e-20
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 100 2e-20
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 95 9e-19
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 81 1e-14
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 78 9e-14
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 78 1e-13
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 70 2e-11
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 67 2e-10
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 66 5e-10
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 62 6e-09
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 57 2e-07
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 56 3e-07
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 56 4e-07
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 53 4e-06
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 48 1e-04
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 44 0.002
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 44 0.002
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.005
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.028
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 40 0.036
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 37 0.26
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 36 0.45
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 36 0.45
UniRef50_A6TKB5 Cluster: Putative uncharacterized protein; n=1; ... 34 1.4
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 34 1.4
UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2; ... 34 1.8
UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain pro... 33 2.4
UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gamb... 33 2.4
UniRef50_UPI00015529D0 Cluster: PREDICTED: similar to DNA-direct... 33 3.2
UniRef50_Q22D17 Cluster: Protein kinase domain containing protei... 33 3.2
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 33 3.2
UniRef50_Q1FH35 Cluster: Resolvase-like:Recombinase; n=1; Clostr... 33 4.2
UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella ... 32 5.5
UniRef50_P36103 Cluster: Uncharacterized protein YKL023W; n=2; S... 32 5.5
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 32 5.5
UniRef50_Q29FD3 Cluster: GA12452-PA; n=1; Drosophila pseudoobscu... 32 7.3
UniRef50_A1G1U7 Cluster: Monovalent cation/proton antiporter, Mn... 31 9.7
UniRef50_O22777 Cluster: Expressed protein; n=1; Arabidopsis tha... 31 9.7
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 124 bits (298), Expect = 1e-27
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +1
Query: 55 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 234
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 235 FGGGKST 255
FGGGK+T
Sbjct: 64 FGGGKTT 70
Score = 94.3 bits (224), Expect = 1e-18
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +3
Query: 246 QVNGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 404
+ GF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 68 KTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 101 bits (241), Expect = 1e-20
Identities = 47/72 (65%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Frame = +1
Query: 43 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVF 219
M+E TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 220 GFKTNFGGGKST 255
F+T+FGGGKS+
Sbjct: 61 KFRTHFGGGKSS 72
Score = 69.7 bits (163), Expect = 3e-11
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +3
Query: 252 NGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 401
+G+ LIYDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+RG
Sbjct: 72 SGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRG 121
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 100 bits (239), Expect = 2e-20
Identities = 44/64 (68%), Positives = 55/64 (85%)
Frame = +1
Query: 64 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 243
IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+VF FGF+T+FGG
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGG 66
Query: 244 GKST 255
GKST
Sbjct: 67 GKST 70
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 255 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 383
GFAL+YD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 71 GFALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 94.7 bits (225), Expect = 9e-19
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +1
Query: 61 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 237
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Query: 238 GGGKST 255
GGGKST
Sbjct: 71 GGGKST 76
Score = 43.6 bits (98), Expect(2) = 3e-08
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +3
Query: 198 SRCSVRIRFQDKLRRWQVNGFALIYDTLDLAKKFEPKHRLAR 323
S C +F+ + GF LIYD LD AKK+EPK+RL R
Sbjct: 58 SNCIFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
Score = 35.9 bits (79), Expect(2) = 3e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 324 HGLYEKKRPTRKQRKERKNRMKKVRG 401
+GL K +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 81.0 bits (191), Expect = 1e-14
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = +1
Query: 55 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 234
T IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 235 FGGGKST 255
+GGGKST
Sbjct: 62 YGGGKST 68
Score = 42.3 bits (95), Expect = 0.005
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 255 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 401
GFAL+YD K+EP +RL + + +K TR+ KE K ++K+ G
Sbjct: 69 GFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSG 117
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 78.2 bits (184), Expect = 9e-14
Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = +1
Query: 61 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 237
T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + + +FGFKT F
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Query: 238 GGGKST 255
GGG+S+
Sbjct: 93 GGGRSS 98
Score = 58.0 bits (134), Expect = 1e-07
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 198 SRCSVRIRFQDKLRRWQVNGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKER 374
+ C V F+ + +GF +IY+ + KKFE ++R R G+ EK T RK RKE
Sbjct: 80 ANCIVLFGFKTAFGGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKET 139
Query: 375 KNRMKKVRGT 404
KNR KKVRGT
Sbjct: 140 KNRRKKVRGT 149
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 77.8 bits (183), Expect = 1e-13
Identities = 34/65 (52%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 237
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Query: 238 GGGKS 252
GGG++
Sbjct: 66 GGGRT 70
Score = 59.3 bits (137), Expect = 4e-08
Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +3
Query: 246 QVNGFALIYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGT 404
+ GF LIY +D KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT
Sbjct: 69 RTKGFGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGT 122
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 70.1 bits (164), Expect = 2e-11
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +1
Query: 61 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 237
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV + + GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Query: 238 GGGKST 255
GGGK++
Sbjct: 69 GGGKTS 74
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +3
Query: 222 FQDKLRRWQVNGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 389
F K + +GFALIYDTL KKF PKH+L R GL +K + RK RKE K + +
Sbjct: 64 FVTKYGGGKTSGFALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWR 119
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 66.9 bits (156), Expect = 2e-10
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +3
Query: 255 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 401
GF LIYD +D KKFEPKHRL R GL + + +RK KE+KNR+KK+RG
Sbjct: 79 GFGLIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKNRVKKLRG 127
Score = 63.3 bits (147), Expect = 3e-09
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 20/78 (25%)
Frame = +1
Query: 82 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 204
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 205 -VVFVFGFKTNFGGGKST 255
V +FGF+T FGGGKST
Sbjct: 61 KCVSIFGFRTAFGGGKST 78
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 65.7 bits (153), Expect = 5e-10
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = +1
Query: 37 FKMSEGTATIRTRKFMTNRLLARKQMVCDVLHP-GKPTVSKTEIREKLAKMYKVTPDV-- 207
F+ + IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD
Sbjct: 3 FQKKKAEVCIRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQ 61
Query: 208 VFVFGFKTNFGGGKST 255
V +FGFKT FGGGK+T
Sbjct: 62 VSLFGFKTKFGGGKTT 77
Score = 58.4 bits (135), Expect = 7e-08
Identities = 28/60 (46%), Positives = 36/60 (60%)
Frame = +3
Query: 222 FQDKLRRWQVNGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 401
F+ K + GF LIYD L K+FEP +R R G + + P RK KER+NR KK+RG
Sbjct: 67 FKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRNKKLRG 126
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 62.1 bits (144), Expect = 6e-09
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +1
Query: 61 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 240
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+V +FG +T FG
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFG 64
Query: 241 GGKST 255
GG +T
Sbjct: 65 GGHTT 69
Score = 55.6 bits (128), Expect = 5e-07
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +3
Query: 255 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 404
GF +YD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+
Sbjct: 70 GFGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGS 119
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = -2
Query: 246 ATSEVCLETEYEHYIGSNLVHFGELLTDLGLADGWFSWM*NIANHLLARQQSVGHELASA 67
ATS+V +T++++ I LVH +L +D L D F+WM I +HLLA Q+SV H+L+ +
Sbjct: 69 ATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLALQKSVCHKLSCS 128
Query: 66 NSRC 55
+S C
Sbjct: 129 DSHC 132
Score = 38.7 bits (86), Expect = 0.064
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = -3
Query: 437 LLGGRTYFRFLGTADLLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLGQIECVVDQSE 258
LL T+ F T LHSVL FFTL + LL++ + G V L L ++ VVD ++
Sbjct: 5 LLFTSTHICFGCTPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAK 64
Query: 257 SVDLPPPKFVLK-PNTNTTSGVTLYILASFSRISV 156
+ K K + N G +++ FS S+
Sbjct: 65 ACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFSL 99
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 56.4 bits (130), Expect = 3e-07
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = +3
Query: 246 QVNGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 401
+ GFALIYDT KFEPK RL R G+ K+ +RK KE K+++KK RG
Sbjct: 99 RTTGFALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRG 150
Score = 55.6 bits (128), Expect = 5e-07
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 55 TATIRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 231
T ++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 232 NFGGGKST 255
FGG ++T
Sbjct: 94 TFGGNRTT 101
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 56.0 bits (129), Expect = 4e-07
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 64 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNFG 240
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P ++F+FG K NFG
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 241 GGK 249
G K
Sbjct: 70 GFK 72
Score = 50.0 bits (114), Expect = 3e-05
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +3
Query: 243 WQVNGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 401
++ + F IY L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G
Sbjct: 71 FKCSAFVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFG 123
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +1
Query: 88 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKST 255
NRLL+RK++ HPG P SK EIREK++++Y+ D V V K +G ++T
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRTT 63
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 47.6 bits (108), Expect = 1e-04
Identities = 19/63 (30%), Positives = 37/63 (58%)
Frame = +1
Query: 64 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 243
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + ++ FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGS 62
Query: 244 GKS 252
KS
Sbjct: 63 YKS 65
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +1
Query: 52 GTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 231
G ++ + N LL RK++ V H G PT + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 232 NFGGGKS 252
+G G S
Sbjct: 96 QYGVGVS 102
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +1
Query: 88 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 252
N+LLAR++++ + +H T ++ +RE +AK + VFV KT FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRS 68
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 42.3 bits (95), Expect = 0.005
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 112 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 210
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 39.9 bits (89), Expect = 0.028
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 255 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 383
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 39.5 bits (88), Expect = 0.036
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 88 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 252
N+++ RK++ V H G PT S+ +IR+ ++ D+V + T +G G S
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAGIS 77
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 36.7 bits (81), Expect = 0.26
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 88 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 240
N LL R+++ C + GK T S+ E+R K+A + P+ V V KT FG
Sbjct: 14 NPLLRRREVYCRLSFEGK-TPSRKEVRGKIAGLMNAEPERVVVDYIKTEFG 63
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 35.9 bits (79), Expect = 0.45
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +1
Query: 40 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVF 219
K+SE I R + N ++ R+++ V H G T+S+ ++ + +A Y D+V +
Sbjct: 10 KISEKAEGIVERD-IKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIK 68
Query: 220 GFKTNFGGGKS 252
T +G G S
Sbjct: 69 KIHTLYGAGIS 79
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 35.9 bits (79), Expect = 0.45
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 88 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 252
N L+ R+++V + H KPT + +R+KLA++ V +++ KT +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAGLS 82
>UniRef50_A6TKB5 Cluster: Putative uncharacterized protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Putative
uncharacterized protein - Alkaliphilus metalliredigens
QYMF
Length = 59
Score = 34.3 bits (75), Expect = 1.4
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -2
Query: 294 SWPDRVCRRSKRIR*LATSEVCLETEYEHYIGSNL 190
S PD+VC +KRI+ LA E + +Y+ Y+GS L
Sbjct: 21 SEPDKVCICAKRIQFLAEKEALAKEDYKRYLGSVL 55
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 34.3 bits (75), Expect = 1.4
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +1
Query: 58 ATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 237
+++R + N+L+ R++++ ++ H G T S+ ++ E L M + V T +
Sbjct: 4 SSLRIIQEKVNKLVGRRELLVEIHHQGSGTPSRRDVAEALRNMLGTGGSAIVVRKLVTRY 63
Query: 238 GGGKS 252
G G S
Sbjct: 64 GQGVS 68
Score = 31.9 bits (69), Expect = 7.3
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 159 RDP*EARQNVQGYSRCSVRIR-FQDKLRRWQVNGFALIYDTLDLAKKFEPKHRLARHGLY 335
RD EA +N+ G ++ +R + + IYD+ K FEPKH L R+GL
Sbjct: 37 RDVAEALRNMLGTGGSAIVVRKLVTRYGQGVSEALIHIYDSDVKMKMFEPKHILRRNGLI 96
Query: 336 EKKRPTRKQ 362
+++ +++
Sbjct: 97 QEQEAKKQE 105
>UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 326
Score = 33.9 bits (74), Expect = 1.8
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 260 RFDLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 409
+ +RH R+ + + + PP+PV+E E + A EQ EE P +E
Sbjct: 110 KITVRHPRNTEPFKELNPLLPPKPVKEGEEEEEKAEEEEEQKEEEPENEE 159
>UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain protein;
n=1; Microscilla marina ATCC 23134|Rep: Von Willebrand
factor type A domain protein - Microscilla marina ATCC
23134
Length = 1088
Score = 33.5 bits (73), Expect = 2.4
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3
Query: 278 CVVDQSESVDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQ 117
C D + LPPPK V+K +TN GV + + F+ +++L + G +S+
Sbjct: 875 CDCDSYKIKQLPPPKIVIKTDTN-YQGVNMTSMKGFAHNNLMLLLDVSGSMSSK 927
>UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021262 - Anopheles gambiae
str. PEST
Length = 1960
Score = 33.5 bits (73), Expect = 2.4
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = -3
Query: 254 VDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNLLVMNL 75
V PP+ V KP TN + TL +L F+ + ++ G P K+++ + + N + +
Sbjct: 6 VSCTPPRAVAKPRTNESREPTLVLLGPFTPKATVVFEGVPVGKSARRLLIVRNTNKTL-V 64
Query: 74 RVRIVAVP 51
+V + VP
Sbjct: 65 QVNLTRVP 72
>UniRef50_UPI00015529D0 Cluster: PREDICTED: similar to DNA-directed
RNA polymerase II largest subunit; n=7; Theria|Rep:
PREDICTED: similar to DNA-directed RNA polymerase II
largest subunit - Mus musculus
Length = 354
Score = 33.1 bits (72), Expect = 3.2
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +3
Query: 135 RKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQVN--GFALIYDTLDLAKKFEPK 308
R+ R+++R+ R+N + R R R + WQ G + KK + K
Sbjct: 206 REREREREREREREREN-EKRERERERERLSEDAAEWQKKKLGKEEEEEKKKKKKKKKKK 264
Query: 309 HRLARHGLYEKKRPTRKQRKERKNRMKK 392
+ + EKK+ T+K+ +E K +MKK
Sbjct: 265 KKKKKKKKEEKKKKTKKEEEEEKKKMKK 292
>UniRef50_Q22D17 Cluster: Protein kinase domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
domain containing protein - Tetrahymena thermophila
SB210
Length = 389
Score = 33.1 bits (72), Expect = 3.2
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = -3
Query: 287 QIECVVDQSESVDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTIC 108
QI C ++QS+ + L + N N + + +LAS S L + +P KT Q+IC
Sbjct: 161 QINCDINQSKFLTLIKANQSNQTNQNYYQSIKVILLASLLA-SYLFSFIYPQIKTIQSIC 219
Query: 107 LRANNLL 87
L NL+
Sbjct: 220 LIHLNLI 226
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 33.1 bits (72), Expect = 3.2
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 88 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 240
N LL RK++ V H T K+E+ KLA + V +VV + ++ FG
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFG 61
>UniRef50_Q1FH35 Cluster: Resolvase-like:Recombinase; n=1;
Clostridium phytofermentans ISDg|Rep:
Resolvase-like:Recombinase - Clostridium phytofermentans
ISDg
Length = 444
Score = 32.7 bits (71), Expect = 4.2
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 180 QNVQGYSRCSVRIRF-QDKLRRWQVNGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTR 356
+N Y RCS R+ +DK+ + +N L+YDT + + K++ +H K +
Sbjct: 295 RNAATYHRCSNRLSIREDKIELYLLNNIQLLYDTHVEKLRIQKKNKKKKHIDKSKIKLKL 354
Query: 357 KQRKE 371
K+ KE
Sbjct: 355 KKLKE 359
>UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 548
Score = 32.3 bits (70), Expect = 5.5
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -2
Query: 402 YRGPSSFCSYVLYAVC--AWASSSRTGRGGLTCAWARTSWP 286
Y S C L+A C WA +++ +TC W R WP
Sbjct: 452 YDDSLSGCGRPLHAECFRMWAVTAKKSGKDVTCVWCRNEWP 492
>UniRef50_P36103 Cluster: Uncharacterized protein YKL023W; n=2;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YKL023W - Saccharomyces cerevisiae (Baker's yeast)
Length = 277
Score = 32.3 bits (70), Expect = 5.5
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Frame = +3
Query: 93 IVGAQADGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQVNGFALIY 272
I GA L+ + RKT + + P E N + + F D VNG A
Sbjct: 78 IGGADPRNLKSKSKRKTKKGGSK-PREENVNTEKHIVMLEVEDFSDMSTHEDVNG-ASPS 135
Query: 273 DTLDLAKKFEPKHRLARHGLYEKKRP-----TRKQRKERKNRMKKVRG 401
LD +KK E + + A+ Y++ + TRK R E K+ KKV G
Sbjct: 136 PNLDRSKKNEKRRKNAKELSYDELKDKLEVTTRKSRLECKDLKKKVHG 183
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 32.3 bits (70), Expect = 5.5
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +1
Query: 88 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 240
N+L R + + V HP + T ++ E +EK+A+M V + + + + +G
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNVDKNKLVIKKIVSKYG 62
>UniRef50_Q29FD3 Cluster: GA12452-PA; n=1; Drosophila
pseudoobscura|Rep: GA12452-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 226
Score = 31.9 bits (69), Expect = 7.3
Identities = 23/87 (26%), Positives = 37/87 (42%)
Frame = +3
Query: 57 SDYSHSQVHDQQIVGAQADGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKL 236
S YS SQ H QQ ++ + R +N+Q +R +N Q SR R +
Sbjct: 123 STYSSSQKHHQQHNSSKGNSERKSKPSSSNKQNNRGNHSRVENNQTRSRNRTTNRTPRGM 182
Query: 237 RRWQVNGFALIYDTLDLAKKFEPKHRL 317
+R+ N F + D K + K+ +
Sbjct: 183 QRYNTNQFENDAELKDYKSKIKNKYNI 209
>UniRef50_A1G1U7 Cluster: Monovalent cation/proton antiporter,
MnhG/PhaG subunit precursor; n=7; Xanthomonadaceae|Rep:
Monovalent cation/proton antiporter, MnhG/PhaG subunit
precursor - Stenotrophomonas maltophilia R551-3
Length = 129
Score = 31.5 bits (68), Expect = 9.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 221 VSRQTSEVASQRIRFDLRHTRSGQEVRAQAQVSPPRPVREEE 346
+S A+ + + R + G E A+ Q+ PP PVREEE
Sbjct: 83 ISAHMMAKAALSLLMETRPSLPGNEPAAEEQLPPPEPVREEE 124
>UniRef50_O22777 Cluster: Expressed protein; n=1; Arabidopsis
thaliana|Rep: Expressed protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 299
Score = 31.5 bits (68), Expect = 9.7
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +3
Query: 201 RCSVRIRFQDKLRRWQVNGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKN 380
R S RIR+ R VNG + + +A KF L G +RPT + +K+
Sbjct: 206 RSSSRIRYNPSTVRNNVNGRGVNRSSAGMASKFGGWDELDGLGTTIPERPTSEPKKKPLP 265
Query: 381 RMKKVR 398
+ K+VR
Sbjct: 266 KRKRVR 271
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,663,359
Number of Sequences: 1657284
Number of extensions: 9705465
Number of successful extensions: 30723
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 29319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30593
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -