Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00859
(799 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 129 4e-31
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 83 6e-17
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 79 1e-15
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 77 3e-15
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 74 2e-14
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 71 3e-13
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 61 2e-10
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 60 3e-10
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 37 0.004
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 3.1
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 27 4.1
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 27 4.1
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 26 7.2
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 25 9.5
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 129 bits (312), Expect = 4e-31
Identities = 64/87 (73%), Positives = 76/87 (87%)
Frame = +1
Query: 256 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACK 435
VEHPA KVLVELAQ QD+EVGDGTTSVVIIAAELL+ A+ELVK KIHPT+II+GYRLA +
Sbjct: 72 VEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIR 131
Query: 436 EAVKYIQDNLTVTVESLGRPSLINKPK 516
EAVK++ D L+ +V+SLG+ SLIN K
Sbjct: 132 EAVKFMTDVLSCSVDSLGKESLINVAK 158
Score = 129 bits (311), Expect = 5e-31
Identities = 60/86 (69%), Positives = 73/86 (84%)
Frame = +3
Query: 510 AKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAINILKAHGRSARESVLV 689
AKT+MSSK+IG D+DFFS M VDA ++KT N +G T YP+KA+NILKAHG+S+RESVLV
Sbjct: 157 AKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILKAHGKSSRESVLV 216
Query: 690 KGYALNCTVASQAMPKKILNAKIASL 767
KGYALNCT+ASQAM ++ NAKIA L
Sbjct: 217 KGYALNCTIASQAMKTRVQNAKIAVL 242
Score = 86.6 bits (205), Expect = 4e-18
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = +2
Query: 71 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 250
L ++G + G+ VR QNV+ N+VKSSLGPVGLDKMLVDDIGDVTVTNDGATIL +
Sbjct: 10 LFLSGEKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSL 69
Query: 251 LE 256
L+
Sbjct: 70 LD 71
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 82.6 bits (195), Expect = 6e-17
Identities = 37/68 (54%), Positives = 53/68 (77%)
Frame = +1
Query: 241 IKNAGVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 420
+K+ +++ AAKVLV ++++QD+EVGDGTTSV + AAELL+ A+ +V KIHP II GY
Sbjct: 67 LKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGY 126
Query: 421 RLACKEAV 444
R+A K A+
Sbjct: 127 RIATKTAI 134
Score = 50.8 bits (116), Expect = 2e-07
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 AGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKML-VDDIGDVTVTNDGATILKML 253
+G + G+ R + + ++VKS+LGP G+DK+L + GD+ VTNDGATILK +
Sbjct: 12 SGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSI 70
Score = 40.7 bits (91), Expect = 2e-04
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +3
Query: 510 AKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAINILKAHGRSARESVLV 689
A+TT+SSK++ + + F+++ VDA +K G+T + I I+K G +S L
Sbjct: 159 ARTTLSSKILSQNKNHFAQLAVDAVLRLK-----GST--NLDNIQIIKILGGKLDDSFLD 211
Query: 690 KGYALNCTVASQAMPKKILNAKI 758
+G+ LN T+ PK + NA I
Sbjct: 212 EGFILNKTIGVNC-PKVMENANI 233
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 78.6 bits (185), Expect = 1e-15
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = +1
Query: 241 IKNAGVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 420
++ V HPAAK ++ELA+ QDEEVGDGTTSV+I+A E+L A L+ KIHP +I +
Sbjct: 65 LREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSF 124
Query: 421 RLACKEAVKYIQDNLTVTV 477
+ A ++A+ I D +T+ V
Sbjct: 125 KQALEDALSII-DEITLPV 142
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +2
Query: 71 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 250
++ G R G + N+ +++++ LGP + KML+D +G V +TNDG IL+
Sbjct: 8 MNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILRE 67
Query: 251 LE 256
+E
Sbjct: 68 IE 69
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 77.0 bits (181), Expect = 3e-15
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +1
Query: 256 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACK 435
VEH AK+LV+L++ QD+E+GDGTT VV++A LL+ A+ L+ IHP I GY AC+
Sbjct: 85 VEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQ 144
Query: 436 EAVKYI 453
AVK++
Sbjct: 145 VAVKHL 150
Score = 55.2 bits (127), Expect = 1e-08
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +2
Query: 101 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLE 256
D V++ +++ NIV++SLGP GLDK+L+ G++TVTNDGATIL +E
Sbjct: 34 DAVKS-HILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQME 84
Score = 42.3 bits (95), Expect = 8e-05
Identities = 27/88 (30%), Positives = 46/88 (52%)
Frame = +3
Query: 504 QQAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAINILKAHGRSARESV 683
+ AKT++ SK++ D F+ + VDA ++ + + IK + G S ++
Sbjct: 169 RSAKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELIKVDGKV---GGSVDDTK 225
Query: 684 LVKGYALNCTVASQAMPKKILNAKIASL 767
LVKG ++ ++ MP +I NAKIA L
Sbjct: 226 LVKGVVVDKDMSHPQMPHRIENAKIAIL 253
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 74.1 bits (174), Expect = 2e-14
Identities = 39/88 (44%), Positives = 57/88 (64%)
Frame = +1
Query: 241 IKNAGVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 420
+K+ V HPAAK+LV+L+ QD E GDGTTSVVI+A +L A++L+K IHPT I +
Sbjct: 65 LKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESF 124
Query: 421 RLACKEAVKYIQDNLTVTVESLGRPSLI 504
+ A V +++N + +E R SL+
Sbjct: 125 QRAAGFTVDCMKEN-ALAIELSDRESLL 151
Score = 52.8 bits (121), Expect = 5e-08
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +2
Query: 107 VRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEWSILLP 274
VR N+M + +++SLGP G+DKM+ G+V +TNDGATILK L S+L P
Sbjct: 20 VRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHL--SVLHP 73
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 70.5 bits (165), Expect = 3e-13
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = +1
Query: 241 IKNAGVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 420
+K + HPAAK LV++A+ QD EVGDGTTSVV+ A ELL+ A V+ + II GY
Sbjct: 70 MKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGY 129
Query: 421 RLACKEAVKYIQD 459
R A + AV I++
Sbjct: 130 RKAAQLAVNKIKE 142
Score = 52.8 bits (121), Expect = 5e-08
Identities = 20/46 (43%), Positives = 35/46 (76%)
Frame = +2
Query: 119 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLE 256
N+ + ++++LGP+G DK++VDD G+V ++NDGATI+K+L+
Sbjct: 29 NINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLD 74
Score = 42.7 bits (96), Expect = 6e-05
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +3
Query: 510 AKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAINILKAHGRSARESVLV 689
A T M+SKLI +++ FF++MVVDA + + N I I K G + +S+LV
Sbjct: 163 ASTAMNSKLIRSNSTFFTKMVVDAVLTLDQEDLNEN------MIGIKKVPGGAMEDSLLV 216
Query: 690 KGYALNCT---VASQAMPKKILNAKIASL 767
KG A T + PK N KI L
Sbjct: 217 KGVAFKKTFSYAGFEQQPKFFKNPKILCL 245
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 61.3 bits (142), Expect = 2e-10
Identities = 31/87 (35%), Positives = 51/87 (58%)
Frame = +1
Query: 256 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACK 435
+++P A + + A QD+ GDGTTSV ++ ELLK A+ ++ +HP+ I G+ LA
Sbjct: 67 IQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKN 126
Query: 436 EAVKYIQDNLTVTVESLGRPSLINKPK 516
EA+ ++ D+ E + R L+N K
Sbjct: 127 EALTFL-DSFKTDFE-VDREVLLNVAK 151
Score = 40.3 bits (90), Expect = 3e-04
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 119 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLE 256
N+ +++KS+LGP G KMLVD G + +T DG +L ++
Sbjct: 21 NISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQ 66
Score = 40.3 bits (90), Expect = 3e-04
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = +3
Query: 510 AKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAINILKAHGRSARESVLV 689
AKT++S+K+ + + VVDA I+ R + + + I+K RSA ++ L+
Sbjct: 150 AKTSLSTKISSKVVESLAPAVVDAILTIR----RPDEPIDLHMVEIMKMQNRSASDTQLI 205
Query: 690 KGYALNCTVASQAMPKKILNAKIASL 767
+G L+ MPK++ NA I L
Sbjct: 206 RGLLLDHGARHPDMPKQVKNAYILIL 231
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 60.5 bits (140), Expect = 3e-10
Identities = 28/95 (29%), Positives = 50/95 (52%)
Frame = +1
Query: 241 IKNAGVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 420
I+ V HPAAK++V+ Q Q+ E+GD VV+ ELL A+ +++ + P I GY
Sbjct: 72 IRELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGY 131
Query: 421 RLACKEAVKYIQDNLTVTVESLGRPSLINKPKRLC 525
+A ++ +++ +E++ + K R C
Sbjct: 132 EMALSHTMEVLEEICADKIETVESEKELIKAIRTC 166
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +2
Query: 149 IVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLE 256
I ++SLGP G +K++V+ + +TND ATI++ LE
Sbjct: 41 ITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELE 76
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +1
Query: 259 EHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKE 438
E+ A+++ ++A +E GDGTT+ ++ + V +P + G +LA
Sbjct: 98 ENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDN 157
Query: 439 AVKYIQDN 462
V+++Q N
Sbjct: 158 VVEFLQAN 165
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 152 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 247
V +LGP G + ++ G +T DG T+ +
Sbjct: 58 VSVTLGPKGRNVLIDQPFGSPKITKDGVTVAR 89
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 328 TSVVIIAAELLKNADELVKTKIHPTSIISGY 420
T++++++ LL E + TK+HP+ +S Y
Sbjct: 302 TNLIVVSVALLHQWAEELSTKVHPSKKLSVY 332
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 26.6 bits (56), Expect = 4.1
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 159 APLGQLVWIRCWLTILGM 212
+PL +++W+ CW +LG+
Sbjct: 149 SPLSKMMWVFCWRWLLGV 166
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 26.6 bits (56), Expect = 4.1
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 159 APLGQLVWIRCWLTILGM 212
+PL +++W+ CW +LG+
Sbjct: 149 SPLSKMMWVFCWRWLLGV 166
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.8 bits (54), Expect = 7.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 162 PLGQLVWIRCWLTILGM 212
PLG+++WI W +LG+
Sbjct: 145 PLGKMMWIFAWRWLLGL 161
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 292 AQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLT 468
A L DE G V+++A + K LV I+P ++ A +K DN+T
Sbjct: 192 ASLLDEGTAAGEAMVMLMANDKKKRKTFLVDKNIYPNTLSVLRTRASGFGIKIELDNIT 250
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,146,999
Number of Sequences: 5004
Number of extensions: 63142
Number of successful extensions: 180
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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