Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00859
         (799 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    25   2.0  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    25   2.0  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    25   2.0  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    25   2.7  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   4.7  
DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    23   8.3  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   8.3  

>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 70  FVCSRDKILRRPSENTKRNGSSGYSKHSKELPWASWSG 183
           F C+ ++  +R +E         Y+  SK  PW  W+G
Sbjct: 560 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKGNPWPRWTG 597


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 70  FVCSRDKILRRPSENTKRNGSSGYSKHSKELPWASWSG 183
           F C+ ++  +R +E         Y+  SK  PW  W+G
Sbjct: 560 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKGNPWPRWTG 597


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 70  FVCSRDKILRRPSENTKRNGSSGYSKHSKELPWASWSG 183
           F C+ ++  +R +E         Y+  SK  PW  W+G
Sbjct: 446 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKGNPWPRWTG 483


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
 Frame = -1

Query: 220 DCNIPNIVNQHLIQT--NWP--KGALYYVCYSRCCHYVL 116
           D N+P++  +++     +WP   G +YY  ++ C  YVL
Sbjct: 186 DVNLPSLGIEYVSYCIEDWPIAYGRVYYSAFTLCVQYVL 224


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 483 TWQAVSDQQAKTTMSSKL 536
           TW A+     KTTMS+K+
Sbjct: 80  TWDALQKHHQKTTMSTKV 97


>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 506 LIRDGLPSDSTVTVRLS*MYLTASLQARRYPEIMLVG 396
           ++R  LP+ S V V    ++  AS  A   P I +VG
Sbjct: 1   MLRKVLPTSSAVKVARKCVFRNASTAAPIRPRICIVG 37


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -1

Query: 121 VLCSHWVSAGSCPCYRQRCGYSRHFLLYF*HKIHFKIAVT 2
           V+C  +     CP  R R  Y+R   L    + HF   +T
Sbjct: 125 VVCGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLT 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,450
Number of Sequences: 2352
Number of extensions: 16549
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)